KEGG   Pteropus vampyrus (large flying fox): 105292684
Entry
105292684         CDS       T07815                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pvp  Pteropus vampyrus (large flying fox)
Pathway
pvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105292684 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvp03041]
    105292684 (PRPF4)
Spliceosome [BR:pvp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    105292684 (PRPF4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR11_1st Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 105292684
NCBI-ProteinID: XP_023386826
UniProt: A0A6P6CH88
LinkDB
Position
Unknown
AA seq 279 aa
MLSFVFDRSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADG
SVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEG
HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIA
TGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWS
PLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 840 nt   +upstreamnt  +downstreamnt
atgctttcctttgtgtttgataggagtgggctttgcaagctctggtctgttcctgattgc
aatctccttcacactcttcgaggccataacacaaatgtaggagcaattgtgtttcatcca
aaatccactgtctccttggaccaaaaagatgttaatctggcttcttgtgctgctgatggt
tctgtgaagctttggagccttgacagtgatgaaccagtggcagatatcgaaggccacaca
gtgcgtgtggcccgggtaatgtggcatccatcaggacgtttcttgggtaccacctgctat
gaccgctcatggcgcttatgggacttggaggctcaagaagagatcctacatcaggaaggc
cacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggcaccggg
ggtctggatgcatttggtcgagtttgggacttgcgcacaggacgttgtatcatgttccta
gaagggcacctgaaggaaatctatggaattaatttctcccccaatggctaccacattgca
actggcagtggtgacaacacttgcaaagtgtgggaccttcgacagcggcgttgtgtctat
accatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatccatgggaat
ttcttgctcactggtgcctatgataacacagccaagatctggacccacccaggctggtcc
ccactgaagactctggctggccatgaaggcaaagttatgggcctagacatttcttccgat
gggcagcttatagccacttgctcatatgacaggaccttcaagctatggatggctgaatag

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