Pteropus vampyrus (large flying fox): 105293548
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Entry
105293548 CDS
T07815
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03440
Homologous recombination
pvp03450
Non-homologous end-joining
pvp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105293548 (RAD50)
03450 Non-homologous end-joining
105293548 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
105293548 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvp03032
]
105293548 (RAD50)
03400 DNA repair and recombination proteins [BR:
pvp03400
]
105293548 (RAD50)
DNA replication proteins [BR:
pvp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105293548 (RAD50)
DNA repair and recombination proteins [BR:
pvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105293548 (RAD50)
BRCA1-C complex
105293548 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
105293548 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SbcC_Walker_B
AAA_21
SMC_N
ABC_tran
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
105293548
NCBI-ProteinID:
XP_011360585
UniProt:
A0A6P3QA50
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKIAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETIRQVRQTQGQKVKECQTELKYLKQNKEKACEIRNQIASKEDQLTSSKEI
VKAYENELDPLKNRLKEIEQNLAKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHKLVRERQEKEAETANQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNIETLKTEVISLQNEKADLDKTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHMNNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRIFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQGIIDLKEKEIPELRNKLQNVNRDMQRLKNDIEEQETLLGTIMP
EEESAKQSLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSITNELKSEKLQISTNLQRRQQLEEQTVEFSTEVQS
LYREIKDAKEQISPLETTLEKFQQEKEELVYKKNTSNKITQDKINDIKEKVKNIHGYMKN
IENYIQDGKDDYKKQKETELDKVIAQLSECEKRKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNDHQKLEEKIENIKRNHSLAIGRQKG
YEEEIIHFKKELRDSQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENIAASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCNVNSLVSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacgattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgcactggagatttccctcctgga
accaaagggaatacatttgttcatgatcccaagattgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaacttgtagctgtgcagagatctatg
gtgtgtactcagaaaagcaaaaagacagagtttaaaaccctggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataacgtcattttctgtcatcaagaa
gattctaactggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagctttggaaacaatccggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagagctaaaatatctgaagcaaaataaagaaaaagct
tgtgagattcgcaatcagattgctagtaaagaagaccagttaacatcttcaaaggaaatt
gtcaaagcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctcgctaaaataatgaaacttgacaatgaaattaaagccttggaaagccgaaagaag
caaatggagaaagataatagtgaactagaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagagagaaagaaagg
aaattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaagtcagaactacttgttgaacagggtcgtctacagctacaggcagatcgccat
caagaaaatatccgagctagagattcattaattcaatctttggcaacacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaaaaattttcacaaacttgtg
agagagagacaagaaaaagaagcagaaactgccaaccaactgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgaaataagggataagaaaattggactggga
agaataattgaactaaaatcagaaatcctaagtaagaagcagaacgaactgaaaaatgtg
aagtacgaattacagcaattggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaatagcaatatagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaagaccctgcgtaaa
ttggaccaggagatggagcagttaaaccatcatacaacaacgcgcacccagatggagatg
ttgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaaattcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagagacagacttgccaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatatgaataatgagctaaaaaggaaggaagag
cagttgtccagttatgaagacaagctttttgatgtttgtggtagccaggattttgaaagt
gatttagacagacttaaagaagaaattgaaaaatcctcaaaacaacgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggatgaaaaccaatcctgt
tgccccgtatgtcagagaatttttcagacagaagctgaattacaagatgtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgatgaaatgctggggcttgtgcccatgaggcaaggcataatt
gatttgaaagagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atgcagcgcctaaagaatgacatagaagaacaggaaacactcttgggtacaatcatgcct
gaagaagaaagtgctaaacagagtctgacagatgttacaattatggagaggttgcagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggactggac
ttggatagaaccgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacctcaaaagtataacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacagcgtcgtcagcagctggaggaacagactgtggaattctccactgaagttcagtcc
ttatacagagagattaaggatgctaaagagcagataagccctttggaaacaacattggaa
aagttccaacaggaaaaagaagaattagtctacaaaaaaaatacaagcaacaaaataaca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatggttatatgaaaaac
attgagaattatattcaggatgggaaagacgactataagaagcaaaaagaaactgaactt
gataaagtaatagctcaactaagtgaatgcgagaaacgcaaagaaaagataaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctgcaggat
aacctaacattaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaagttttacaaatgaaaaatgaccatcaaaagttg
gaagaaaaaatagaaaatataaaaagaaatcacagtttggcaatagggcgacagaagggt
tatgaagaagaaattattcattttaagaaagagcttcgagactctcaatttcgagatgct
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtaaacaaggat
ctggacatttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcattcgcgacctttggcgaagtacctatcgcggacaagatatc
gaatatatagaaattcgctctgatgccgatgaaaacatagcagcttctgataaaaggcgg
aattacaactacagagtagtgatgctaaaaggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcatcgctcattattcgcctggccctggctgaaacg
ttctgcttaaactgtggcattcttgccttggatgagccaacaacaaatctggaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacagcaacgt
aacttccagcttctggtaatcactcatgacgaagattttgtggagctcttagggcggtct
gaatatgtggaaaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgcaatgtcaactccctggtatcttacgttcattaa
DBGET
integrated database retrieval system
