Pteropus vampyrus (large flying fox): 105293856
Help
Entry
105293856 CDS
T07815
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03082
ATP-dependent chromatin remodeling
pvp04714
Thermogenesis
pvp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105293856 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105293856 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105293856 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvp03000
]
105293856 (ARID1B)
03021 Transcription machinery [BR:
pvp03021
]
105293856 (ARID1B)
03036 Chromosome and associated proteins [BR:
pvp03036
]
105293856 (ARID1B)
Transcription factors [BR:
pvp03000
]
Eukaryotic type
Helix-turn-helix
ARID
105293856 (ARID1B)
Transcription machinery [BR:
pvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105293856 (ARID1B)
Chromosome and associated proteins [BR:
pvp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105293856 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105293856
NCBI-ProteinID:
XP_023387933
UniProt:
A0A6P6CKR7
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MLGGGGDGGGLNSVHHHPLHPRHELNMAHNASAAAAAASTHSAKSGGSEAALKEGGSAAA
PCSSSSAASSSSSSGPGSAMETGLLPNHKLKTVGEAPSAPPHHHRHAHHHHHHAHHLQHH
HALQQQLNQFQQQQQQQHPISNSSSLGGGAAQPGPDMEQPQHGGAKDSAAGSQADPPGQP
LLSKPGDEDDAPPKMGEPAGGRYEHPGLGKFVVKKNRIFGSFDAYVDLFENVMISFERGV
MAAMEIAGEIRDSSVFTYHSDMSLGLFIHANHTSDSFRMIVFEGAQGSPMDPMVMKRPQL
YGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMGGMQYPQQQMPPQYGQQG
VSGYCQQGQQPYYNQQPQPPHLPPQAQYLPPQSQQRYQPQQDMSQEGYGTRSQPSLAPGK
PNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFS
PHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPAL
SQSPMPQERGFMTGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHSGISSFQQSNSSGTYG
PQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRLPS
AGMQSRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQ
GGFPGMNQSGLMASSSPYSQPMNNSSGLMNTQVPPYSVTPNMVNSSTASMGLADMMSPGE
SKLPLPLKADGKEEGAAQPESKTKDSYSSQGISQPPTPGNLPVPSPMSPSSKSSSSTTTG
EKITKVYELGSEPERKLWVDRYLTFMEERGSPVASLPAVGKKPLDLFRLYVCVKEIGGLA
QVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGETKK
QPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTV
SVHDPFSDASDSSFPKRNSMTPSAPYQQSMSMPDVMGRVPYEPNKDPFGGMRKVPGSSEP
FMTQGQLPTSGMQDMYNQSPSGAMSSLGLGQRPQFPYGTSYDRSKQCHGTGEKGLVRRQA
SAAVFFYVNAQKHELELYWGRAGPTPSSPPSTRVLCHHAESDTSSSQVWPVLRSPENCRV
SSATSVPPATFGPSRTLSGFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALGHNAVKKG
DSQALADDSGEEEEDAECTDGEEDEEDEEEEEDGGKAGTEKGSTASTPPDATADPREKPR
QASKFDKLPIKVVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKME
IPPRRRPPPVSSAGRKKEQEGKADSEEQQEKSIIATIDDVLSARPGALPEDATPGAQTES
SKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTVAHWQDSLAKRCICVSNIVRSLSFVPG
NDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVL
RDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQR
LVLEALCKLSIQDSNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQ
GDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHTLMHMQPPPLEPPSVDMMCRAAK
ALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggcggcggcgacggcggcggcctgaacagtgtgcaccaccaccccttgcac
ccccgtcacgaactgaacatggcccataacgcgagcgcggcggccgccgccgccagcacc
cacagcgccaagagcggcggatccgaggcggctctcaaggagggtggaagcgccgccgcg
ccgtgctcgtcctcctccgcggcgtcctcttcctcctcgtcgggcccgggctcggccatg
gagacggggctgctccccaaccacaaactgaaaaccgttggcgaagccccctccgcgccg
ccccaccaccaccgccatgcccaccaccaccaccaccatgcccaccacctccagcaccac
cacgcactccagcagcagctaaaccagttccagcagcagcagcagcagcaacatcccatt
tccaacagcagcagcctcggcggcggcgcggctcagccgggtcccgacatggagcagccg
caacatggaggcgccaaggacagtgccgcgggcagccaggccgaccccccgggccagcct
ctgctgagcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggc
ggccgctacgagcacccgggcctgggcaaatttgtggtgaagaaaaatagaatatttggc
tcgtttgatgcttatgtggatctgtttgaaaatgtgatgatctcgtttgaaagaggcgtg
atggcagccatggagattgctggggaaatccgtgactcctctgtctttacgtaccactcc
gatatgtctttgggattgtttattcatgcaaatcacacatcagacagctttagaatgatc
gtctttgagggagcacagggcagcccaatggatcccatggtgatgaagagacctcagttg
tatgggatgggcagtaaccctcattctcagcctcagcagagcagtccttacccgggaggt
tcctacggtcccccaggtccacagcggtatccaattggcatccaaggccggaccccaggg
gccatgggaggaatgcagtacccacagcagcagatgccacctcagtatggacagcaaggt
gtgagcggttactgccagcagggccagcagccttattacaaccagcagccacagcctcca
cacctccctccgcaggcccagtacctgccaccccagtcccagcagaggtaccagccgcag
caggacatgtctcaggaaggctatggaactaggtctcaaccttctttggctcctggaaaa
cctaaccacgaagacttgaacttgatacaacaagaaagaccatcaagtttaccagacctg
tctggctccattgatgacctccccacgggaacagaagcaactttgagctcagcggtcagc
gcatccgggtccacgagcagccaaggggatcagagcaacccggcgcagtcccctttctcg
ccacacgcgtccccgcatctgtccagcatcccggggggcccgtcaccttctcctgtcggc
tctcctgtcggcagcaaccagtcacgatctggcccaatttctcctgcaagtattccaggc
agtcagatgccgccccagccgcctgggagtcagtcagagtcgagttcccatcctgccttg
agccagtcaccgatgccacaggaaagaggttttatgacaggcacacaaagaaaccctcag
atgtctcagtatggacctcaacagacaggaccatccatgtcgcctcatccttctcccgga
ggtcagatgcattctggaatcagtagctttcagcagagtaactcaagtgggacttacggt
ccacagatgagccagtatggaccacaaggtaactactccagacccccaacgtatagcggg
gtgcccagtgcaagctacagcggcccagggcctggcatgggcatcaatgccaacaaccag
atgcatggacaagggccaagccagccgtgtggtgctatgcccctgggacgattgccatca
gctgggatgcagagcagaccatttcctggaaacatgagcagcatgacccccagttctccc
ggcatgtctcagcagggggggccaggaatggggccaccaatgccaaccgtgaaccgtaag
gcacaggaggcagctgccgcagtgatgcaggccgctgcaaactcagcacaaagcaggcag
ggcgggtttccaggcatgaatcagagcggactgatggcctccagctctccctacagccag
cccatgaacaacagctccgggctgatgaacacgcaggtgccaccctacagtgtgacgccc
aatatggtgaacagctccacagcatctatgggtcttgcagatatgatgtctcctggtgaa
tccaaattgcccctgcctctcaaagcagatggtaaagaagaaggcgctgcacagcctgag
agcaagacaaaggatagctacagctctcagggtatttctcagcccccaacccccggcaac
ctgccagtcccttccccaatgtcccccagctctaagtccagctcctccaccaccacggga
gagaagatcacaaaggtgtacgagttggggagtgagccggagagaaagctgtgggtcgac
cgctaccttaccttcatggaagagaggggctccccggtcgcaagtctgcctgcagtgggc
aagaagcccctggacctgttccgactctatgtctgtgtcaaggagatcggaggtttggcg
caggttaataaaaacaagaagtggcgtgagctggccaccaacctcaacgtcggcacttca
agtagtgcagcgagctccctgaaaaagcagtacatccagtacctgtttgcctttgagtgc
aagattgagcgcggggaggagcccccgccagaagtcttcagcaccggggagaccaagaag
cagcccaagctgcagccgccatctcctgctaactccggatccctgcaaggtccacagacc
ccccagtccactggcagtaattcgatggcagaggttccgggtgacctgaagccacctaca
ccagcctccacccctcatggacagatgaccccaatgcaaggcggaagaagcagtacagtc
agtgtgcacgacccgttctcggacgcgagcgattcctcgttcccaaaacggaactccatg
accccgagcgccccgtaccagcagagcatgagtatgccagacgtgatgggcagggtgccc
tacgagcccaacaaggaccccttcggcggcatgagaaaagtgcctggaagtagtgagccc
tttatgacgcaaggacagctgcccactagcggcatgcaggacatgtacaaccaaagtccc
tctggagcgatgtccagtctgggcctggggcagcggccacagtttccctatggaaccagt
tacgatcgaagcaagcagtgtcacgggacgggtgagaagggccttgtccgcaggcaggca
agcgcagctgtgtttttctacgtgaatgcccaaaagcacgagttagaactgtactggggc
cgggccggccccactcccagcagccctcccagcactcgggtgctgtgccaccacgctgag
tctgacacctctagctctcaggtgtggcccgtcttaagatctcctgagaactgccgagtg
tccagcgccacctctgtgcctcctgctacgtttggtccttcaaggacgttgtctggattt
ctcgaacttttggtagagtactttagaaaatgcctgattgacatttttggaattcttacg
gaatatgaagtgggagaccccagccaaaaagcacttggtcacaatgcagtgaagaaaggt
gacagccaggccctggccgatgattctggggaggaggaggaagatgctgagtgtacggac
ggggaggaggacgaggaggacgaggaggaggaggaggacggtgggaaagcgggcacagag
aagggcagcacggcctcgaccccgcccgacgccactgcagacccaagggagaagcccaga
caagccagcaagttcgacaagctgcccataaaggttgtcaaaaagaacaacctgtttgtc
gttgaccggtctgacaagttgggtcgtgtccaggagttcaacagcgggcttctgcactgg
cagctgggtggcggggacaccaccgagcacatccagacccacttcgagagcaagatggaa
atccctccgcgcaggcgccccccgcctgtaagctccgccggtcgcaagaaagagcaggaa
gggaaagcggattcggaagaacagcaggagaaaagcatcatcgcaaccatcgacgatgtc
ctgtccgctcggccaggggcgctgcccgaggacgcgaccccgggggcccagaccgaaagc
agcaagtttccctttggcatacatcaggccaagagccaccggaacatcaagctgctggag
gacgagccgaggagccgcgacgagacgcctctgtgcaccgtggcgcactggcaggattcc
ctggccaagcgctgcatctgcgtgtcgaacattgtccgcagcttgtcttttgtgcctggc
aatgacgccgagatgtccaaacatccaggcttggtgctgatcctggggaagctgatcctt
cttcaccacgagcatccggagaggaaacgggcaccgcagacctacgagaaagaggaagat
gaggacaaaggggtcgcctgcagcaaggacgagtggtggtgggactgcctggaggtccta
cgggataacacgttggtcaccttggccaacatctctgggcagctagacttgtccgcttac
acggaaagcatctgcctgccgatcctggatggcttgctgcactggatggtgtgcccatct
gcggaggcacaagacccctttccgactgtgggacccaactctgtcctgtcgcctcagaga
cttgtgctggaggccctgtgtaagctcagcatccaggacagcaatgtggacctgatcttg
gccacgcctccgtttagtcgtcaggagaaattctatgctacgttagttaggtacgttggg
gatcgcaaaaacccagtctgtcgagaaatgtccatggcgcttttatcgaaccttgcccaa
ggggacacgctggcagcaagggcaatagctgtgcaaaaaggaagcattggaaacttgata
agcttcctggaggatggggtcacgatggcccagtatcagcagagccagcataccctcatg
cacatgcagcccccacccctagaaccgcccagcgtggacatgatgtgcagggcggccaag
gcgctgctggccatggccagggtggacgagaaccgctcggagttccttctgcacgagggt
cgattgctggatatctcgatatcagccgtcctgaactctctggtcgcctccgtcatctgt
gatgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
