Pteropus vampyrus (large flying fox): 105295238
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Entry
105295238 CDS
T07815
Symbol
CDC40
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105295238 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvp03041
]
105295238 (CDC40)
Spliceosome [BR:
pvp03041
]
Complex C
Other components
Step II factors
105295238 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105295238
NCBI-ProteinID:
XP_011363129
UniProt:
A0A6P3QDC6
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCQLPAADSLMHLTKSASAKPSLVVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNHQVATKYIGXVEEAEKNQGLTVFETGQKKIEKRKK
FKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTI
LHVKEMYDYQGRSYLHIPQDVGVNLRSAVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNTAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTT
KLYSRFKAHEKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgctattgcctctctggctgcttcctatggttcgggttcaggatccgaatcg
gactcggacagtgagggtggacggtgtcagctgccagctgccgactccctcatgcacttg
actaaatcagcttctgccaagccttctctggtagtggcggtggactcggctccagaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataatcctacctatgagactatgtttgctcctgagtttggaccagaaaatccctttagg
acacagcaaatggctgcgcctagaaatatgctctctggatatgccgaaccagctcatatc
aatgacttcatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcattagataatcatcaagtggctactaagtatattggtntcgtagaagaagctgaa
aaaaatcaaggtttaactgtatttgaaactggtcagaagaaaatcgaaaagaggaaaaag
ttcaaagaaaatgacgcatctaatattgatggtttcttgggaccttgggcaaaatatgtg
gatgaaaaagatgtagccaaaccttcagaagaagaacaaaaagaattggatgaaattaca
gcaaagaggcagaaaaaaggcaaacaggaggaagagaaacctggggaggaaaagacaatc
ttacatgttaaagaaatgtatgactatcaaggcaggtcctatctccacatacctcaggat
gttggtgttaatcttcggtcagctgtgccacctgagaagtgttatcttcccaaaaaacaa
attcatgtatggtccggacataccaagggtgtcagtgcagtcagattgtttcctctctct
ggccatttattgctgtcttgttccatggactgtaaaattaagctatgggaggtttatgga
gacaggcgctgtttgcgaacatttattggtcacggtaaagctgttagggacatctgcttt
aatactgcaggaacacagttcctcagtgcagcttatgacaggtatcttaagctctgggac
actgagacaggacagtgtatatcaagatttacaaaccgaaaagtaccctattgtgtcaaa
tttaatcctgatgaagataagcaaaatctcttcgtggctgggatgtctgataaaaagatt
gtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcatttgggagct
gtcaacaccattgtttttgttgatgaaaataggagatttgtgagcacatctgacgataag
agcctaagagtttgggaatgggatatccctgtggatttcaagtatatcgcagaacccagt
atgcactctatgcccgcagtgaccttgtctccaaatgggaaatggctagcatgccagtca
atggacaaccaaatcttgatttttggagcacagaacagatttagattaaataagaaaaaa
atttttaaaggccatatggtagcaggttatgcttgtcaagtggacttttcaccagatatg
agctatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagaccaca
aaactgtacagtcggtttaaagctcatgaaaaagtgtgtataggtgctgtgtggcatcct
catgaaacatctaaagtcataacctgtggttgggatggtctcattaaattgtgggattaa
DBGET
integrated database retrieval system
