Pteropus vampyrus (large flying fox): 105297419
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Entry
105297419 CDS
T07815
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105297419 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvp03041
]
105297419 (PRPF38B)
Spliceosome [BR:
pvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105297419 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
105297419 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
105297419
NCBI-ProteinID:
XP_011366393
UniProt:
A0A6P3QKG1
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGCSSFDRELERE
KERQRLEREAKEREKERRRSRSTDRGLERRHSRSRERHRSRSRSRDRKGDRRDRDREREK
ENERGRRRDRDYDKERGADREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKKE
SKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKSESKEKSNKRSRSGSQGR
TDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEKQ
HKDKDETV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcaacaccaggcggccgca
gccgcggcccagcagcagcagcagcagcagtgcggcggcggcggcgccaccaagccggcg
gtctcgggcaagcagggcaacgtgctgccattgtggggcaacgaaaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccgtacttcaaagtgcagctctacgag
ctcaagacctaccatgaggtggtggacgagatttactttaaggtcacacatgttgaacca
tgggagaaaggaagcaggaaaacggcaggccaaacagggatgtgcggaggggttcgaggt
gttggaacaggaggaatagtttcgacagctttttgcctgttatacaaattatttactctg
aagttaactcgtaagcaagttatgggtcttataacacacacagactctccatatattaga
gcccttggatttatgtatatacggtatacacagccccctacagatctatgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtgatg
accatcggagaaatgctgcggtcttttctcacaaaactggagtggttttctactttgttt
ccaagaattccagttccagttcagaagaatatcgatcaacagattaaaactcggcctaga
aaaattaagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgagcgcaga
cgttcgaggtctccaaggagatcactgagtccacggaggtccccaagaagatcgagaagt
agaagccatcatcgggagggccatgggtgttctagttttgaccgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagaaagagagaaagaaaggcgaaggtcc
cggagtaccgatcggggattagagcgcaggcatagcaggagtagggaaaggcatagaagt
cgtagtcgaagtcgtgataggaaaggagacagaagagacagggatcgggaaagagagaaa
gaaaatgagagaggtagaagacgagatcgcgactacgataaggaaagaggtgctgaccga
gaaaaggagagagaacgatcaagagaacggtccaaggaacggagaagtaggggtgaggta
gaagaaaagaagcataaagaagacaaagatgatagacggcatagggatgacaaaaaagag
tccaagaaagagaaaaagcacagcagaagtagaagcagagaaaggaaacacagaagtagg
agtagaagcagaaatgcagggaaacgaagtagaagcaggagtaaagagaaatcaagtaaa
cataaaagtgaaagtaaagaaaaatcaaataaaagaagtagaagtggcagtcaaggaaga
actgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatctaga
aagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggaccag
tctgataaacacgatcgtcgaaggagccaaagtatagaaccggagagccaagaaaaacag
cataaggacaaagacgagactgtgtga
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