Pteropus vampyrus (large flying fox): 105297520
Help
Entry
105297520 CDS
T07815
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23 isoform X1
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105297520 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvp03041
]
105297520 (DDX23)
Enzymes [BR:
pvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105297520 (DDX23)
Spliceosome [BR:
pvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105297520 (DDX23)
Complex C
U5 SnRNP specific factors
105297520 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
105297520
NCBI-ProteinID:
XP_011366546
UniProt:
A0A6P3QUT9
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MMPRILYREISLLECFLRAMAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPS
KDRKRHRSRDRRRGGSRSRSRSRSKSTERERRHKERERDKERDRNKKDRDRDKDGHRRDK
DRKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKP
KFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERM
ERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASED
TSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLR
KLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPH
ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDR
IEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEI
VIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDE
AEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQ
KVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQE
QREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKS
GVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccaggatactttatagagaaattagccttctggagtgttttcttagggctatg
gcaggagagctggctgacaagaaggaccgtgatgcatcaccttccaaggaggaaaggaag
cgatctcggactcctgacagagagcgggatagagaccgggaccggaagtcttccccatct
aaagacaggaagcggcatcgttcaagggataggcgtagaggagggagccggtctcgttcc
cgttcccggtccaagtctacggaaagagaacgacggcataaagaacgagaacgagataag
gagcgggatcgaaataagaaggaccgagatcgggataaggatgggcacagacgggacaag
gaccggaaacgatccagtttatctcctggtcgaggaaaagattttaaatctcggaaagac
agagactccaagaaggatgaagaggatgaacatggtgataagaagccaaaggcccagcca
ttatccctggaggaacttctggccaagaaaaaggctgaagaggaagctgaggctaagccc
aagttcctctccaaagcagaaagagaagccgaagctctaaagcggcggcagcaggaggtg
gaagagcggcaaaggatgctcgaagaagagaggaaaaaaaggaagcagtttcaagacttg
ggaaggaagatgttggaagaccctcaggaacgggaacgtcgggaacgcagggagaggatg
gagcgggagaccaatggaaacgaggatgaggaagggcggcagaagatccgagaggaaaag
gataagagcaaggaactgcatgccattaaggagcgttacctgggcggcattaagaagagg
cgccgaacaaggcatctcaatgatcgcaagtttgtctttgagtgggatgcatcggaggac
acatccatagactacaacccactgtacaaagaacggcaccaggtacagttgttggggcga
ggcttcattgcaggcattgacttaaagcagcagaaacgagagcaatcacgtttctatgga
gacctaatggagaagaggcggaccctggaagaaaaggagcaggaggaggcaagactccgc
aaacttcgtaaaaaggaagccaagcagcgctgggatgatcggcattggtcccagaagaag
ttagatgagatgacagacagggactggcggatcttccgtgaggactacagcatcactacc
aaaggtggcaagatccccaatcccattcgatcctggaaagactcttctctgcccccacat
atcttggaggtcatcgataagtgtggctacaaggaaccaacacctatccagcgtcaggca
attcccattggtctacagaatcgtgacatcataggtgtggctgagactggcagtggcaag
acagcagctttcctcattccattgctggtctggatcaccacgcttcccaaaattgacagg
atcgaagagtcagaccagggcccttatgctatcatcttggcccctactcgtgagctggct
cagcagattgaggaagagaccatcaagtttgggaagccactaggcatccgcactgtggct
gtcattggcggcatctccagagaagaccagggcttcaggctgcgcatgggttgtgagatt
gtgatcgctaccccgggacgtctgattgatgtgctagagaaccgttacctggtgctgagc
cgctgtacctacgtcgttctggatgaggcagataggatgattgacatgggctttgagcca
gacgtccagaagatcctggaacacatgcctgtcagcaaccagaagccagacacagatgag
gctgaagaccctgagaagatgttggctaactttgagtcaggaaaacataagtaccgccaa
acagtcatgttcacggccaccatgcccccagctgtggagcgtctggcccggagctatctt
cggcgtcctgctgtggtgtacattggctctgcaggcaagccccatgaacgtgtggaacag
aaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggcaatcttggagcaa
ggctttgatccacccatcatcatctttgtcaaccagaagaagggctgtgatgttttggcc
aaatccctggagaagatggggtacaatgcttgtacacttcatggtggaaaaggccaggag
cagcgagagtttgcattgtccaacctcaaggctggggccaaggatattttggtggctaca
gatgtggcaggtcgtggtattgacatccaagatgtgtcaatggtggtcaactacgatatg
gccaaaaacattgaagattatatccaccgcattggccgcacaggaagagcaggcaagagt
ggcgtggctatcaccttcctcaccaaagaggactctgctgtgttctatgagctgaaacaa
gccatcctggaaagcccagtgtcctcctgccccccagaactagccaaccacccagatgcc
cagcacaagccaggcaccatccttaccaagaagcgcagagaagagaccatctttgcctga
DBGET
integrated database retrieval system
