Pteropus vampyrus (large flying fox): 105300461
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Entry
105300461 CDS
T07815
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03018
RNA degradation
pvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105300461 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
105300461 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvp03019
]
105300461 (LSM7)
03041 Spliceosome [BR:
pvp03041
]
105300461 (LSM7)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105300461 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
105300461 (LSM7)
Spliceosome [BR:
pvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105300461 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
105300461
NCBI-ProteinID:
XP_011370994
UniProt:
A0A6P3QWC2
LinkDB
All DBs
Position
Unknown
AA seq
144 aa
AA seq
DB search
MVQRDPAEEEGPPNFRARARRPAERAARGPAALSASRALFFPQDKEKKKKESILDLSKYI
DKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGT
SVVLICPQDGMEAIPNPFIQQQEA
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggtccagcgggacccggcggaggaagaggggcccccaaactttagagcccgtgcgagg
aggccggcggagcgggcggcgaggggtccggccgcgctctccgcctcacgcgctctgttt
ttcccgcaggacaaagagaagaagaagaaggagagcatcttggacctgtccaagtacatc
gacaagacgatccgggtgaagtttcaggggggccgcgaagccagtggaatcctgaaaggg
ttcgacccgctcctcaaccttgtgctcgacggcaccattgagtacatgagagaccccgat
gaccagtacaagctcacggaggacacccgccagctgggcctggtggtgtgcaggggcacc
tccgtggtgctcatctgcccgcaggacggcatggaggccatccccaaccccttcatccag
cagcaggaggcctag
DBGET
integrated database retrieval system
