Pteropus vampyrus (large flying fox): 105303102
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Entry
105303102 CDS
T07815
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105303102 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvp04121
]
105303102 (SLX4)
03400 DNA repair and recombination proteins [BR:
pvp03400
]
105303102 (SLX4)
Ubiquitin system [BR:
pvp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105303102 (SLX4)
DNA repair and recombination proteins [BR:
pvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105303102 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
105303102
NCBI-ProteinID:
XP_011374818
UniProt:
A0A6P3R5H9
LinkDB
All DBs
Position
Unknown
AA seq
1804 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGTKEVSGERKTQKASNSTQRTSKPKRTKPTATKSKTL
QGPRERKTRSGSQAPRTKKQGAPKWQESESAPPENGERSVLASAVLWESAQSTQTGNPAR
NXARTSREEAREAAPNSDSQPPPFCLTAMVPSPSKPRAAELVLQRMQQFKRADPERLKHA
SEGCSLQAALEENVPKGPQEAMAGNGTMGISCLPNRDKRSGPWLPATESDTAVALALQQE
FGHEQASTHDDSLEEKGLFFCQICQKNLSAMNVIRREQHVNRCLDEAEKALRPSVPQIPE
CPICGKPFLTPKSRISHLKQCAVKMEVGPQLLLQAVRLQTVQPEGTCSTLAPASSFRNHV
GSLKRKGAPSKKEPQKRRKVNEPEVPSEDLLVAMALSRSEMKQEAVPAVLRLGTAFSERT
KLATEKKSRKKKVPISPPQLLVQDLETTGRQIEDRVAQLFAEEVELSSTPPLPESRLLKE
DLEKASKCQRLPEKKQNFLWEGSALTGAWALESFYTASLVPSMVPQRPEKESMLPPVLPD
QPELGVRMPPILHSASPRNPSPSASQREHQALQDLIDLAGEGLSTSPWPCSRGLGGSGGT
EGMDLLPGGLPLTGFVLPPKEQHLERGGQASLSLSLLVADFGAMVNNPHLSDIQFQMDSG
EVLYVHKFVLYARCPLLIQYVNSEGFFAVEDGDLRTQRVLLSDVSTEAMRAFLHYLYTAD
TGLPPQLAPDLSFLARRFGVNELVHLCEQASVVMDSEDEQWKEKEDKDCESRVENFQELL
RAVWVDEEEEAEALLQPEGHEEDREKVNEAEMEEIYEFAATQRKLLQEERAPEIEEETDQ
LGEDGPSPRQIVASVQVKEQSENEEQIELFGQGRDEAPAKWKTVRQSMLLPLESQCSDRE
EAVEAQKEALDHSSSSNPSQGCQAERREGVFLYSVDVDDDEQPFASTPGGYPEPSQITSD
LKEGNSTVGEKGTESSCPSTHQQTPPSRRCFFPSQSPPGRSPRQPHPRLHRTTASSPPKP
QSQGRASRVDSQDSPLKQRRGRSLLTLLDDPGCQKGKERGSMLECRNKGVLISPEKSLSI
DLTQAKPSHRSSRSQNSLSSVNREDEIILLLDSDEELELEQSKIKSVFNSPPEEGKVLKV
SPKSSELFSVIDVDADQELSQSPPRRDATLQQEEGGASGNQGSVDGKETPQLFRDPESSP
DEASTTDTSWLVPATPLASRSRDCSSQTQIMGLKSRTSVDQTAQLKPRAPLENKDGPEAA
NKFSVIMPQTSSSCLVPVAPGSPDSRSQIYRSPSSPHPRRHKHFSPLSPCPTSGALTDFS
RQFQNCSPPRPSLLNQATASEVVEVEDSEDEQEMASRQASSSLLLDSNPPIPSDDSCWHV
EPLSPIPIDHLNLERTGPLSTSSPGGKVGEVWHNSDCHSPALLGTTPIRGSCTGRGSCTG
GRKSQEKSPRAGSPGSSRLSFLNSALWDDWDEEQKSPEVLPLAQTPSADRAQKSEGLKKP
SANRRKNLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTL
ESDSEDESQSSQVLLEAPCSQTHTTKTSKASRAAGCTSLEATSDLVPQRSKESAKSKGPQ
HRKQQPGGSISPRSMLPAEEVPLSPDGDTQLPASQKSMTTSVDSGDSSFSSQSSSSCEFG
VAFESAGEDEGEDGVSASQAAVQAVTTEEAVRRYIRSTPALYRKVLLYQPFELAELQAEL
KQQGIRMTTGKLLDFLDAHCITFTTAAARKEKLERKRQQPVGKKKRGKTNQPVPRSPPMA
ISSL
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtcagatgatgattttaaggaactctgtgccagttttttccaaagagtg
aaaaagaatggcaccaaggaagtgtcaggggaaagaaagacacaaaaggcctcaaacagc
actcaaagaaccagcaaaccgaaaaggaccaaaccaactgccaccaagagcaaaaccctt
cagggccccagggaaaggaaaactcgatctggtagccaggccccaaggacaaaaaagcaa
ggggcacccaagtggcaggagagtgaatcagctccccctgagaatggagaacgaagtgtg
cttgcttctgctgttctctgggagagtgcacagagcacccagacaggtaacccagccaga
aacnntgctagaacttccagagaggaagccagggaggctgctcccaacagcgactcccag
ccccctcctttctgtctgactgcgatggtgccaagtccctccaaaccccgggcagctgag
ctggtcctacagcgaatgcagcagttcaagagagcagacccagaacgtttgaaacatgct
tcagaagggtgctcactccaggctgcacttgaagaaaatgtcccaaagggccctcaagag
gcgatggcagggaatggtacgatgggaatttcctgtcttcccaatagagataaaaggtct
gggccctggctccctgccacagagagtgacactgcagtggccttagccctgcagcaggag
tttgggcatgaacaagcatctacacatgacgatagcctggaggagaagggcttgtttttc
tgccagatctgtcaaaagaacctctcagctatgaatgtgatacgaagggagcagcacgtg
aaccggtgcctggatgaggctgaaaaggcactgagaccttccgtgcctcagatccctgaa
tgcccaatttgtggcaagccatttctcaccccaaagagcagaatcagtcacttgaaacag
tgtgcagtgaagatggaggttggccctcagctcctgctccaggctgtgcggctgcagaca
gttcagcccgaggggacctgcagcacactggcaccagcatctagcttcagaaatcacgtt
ggaagtctgaagcggaagggagcccccagtaagaaagaaccacagaagaggcggaaagtc
aacgagcctgaggtgccatctgaggacctgctggtggccatggctctgtcccggtctgag
atgaagcaggaggctgtgcccgcagtgctcagactgggaacggctttttctgagagaaca
aaactggcaacagagaagaagagtcgcaagaagaaagttcctatttccccaccccagttg
ttagtccaggacttggaaactacagggagacagattgaggatcgcgtggctcagctcttt
gcggaggaagtagaattgtctagcactccaccacttcctgagagcagactcctaaaggaa
gatctggaaaaggccagcaagtgtcagcgactgcctgaaaagaagcagaacttcctgtgg
gagggtagcgcgctgactggggcctgggctctggaatccttctacacggcaagcttggtg
ccttccatggttccccagcggcccgagaaggagtccatgctgccaccagtgctgccagac
cagccagagctaggtgtgcgcatgccacctattctccacagtgccagccccaggaaccca
tcaccctctgccagccagagggagcaccaagccctgcaggacctcatagacctagcagga
gaggggctgagcaccagcccatggccctgcagcaggggcctgggcggctcgggagggact
gaagggatggatctgttgcctggtggacttccactgactgggtttgtcctgccacctaag
gagcagcacctggagaggggcggccaagcttcgctctccctcagtttgctggttgctgac
ttcggtgccatggtcaataacccacacctgagcgacatccaatttcagatggacagcggg
gaagtgctatatgtccacaagttcgtgctttatgccagatgcccacttctcattcagtat
gtaaatagtgaaggcttctttgctgtagaagatggcgacctgagaacccagcgtgtcctg
ctgagtgacgtgagcactgaggccatgcgtgcattcctgcattatctctacaccgcagac
actggcctgcctccgcagctggcccctgacctgagtttcctggcccgcaggtttggtgtg
aatgagcttgttcacctctgtgaacaagcgtctgttgtgatggattcagaggatgaacaa
tggaaagagaaggaagacaaggactgtgaaagcagagtggagaatttccaagaactcttg
agggcagtgtgggtagatgaagaggaggaagcagaggccttgttgcaacctgagggccat
gaagaagacagagaaaaggtcaatgaagcagaaatggaagaaatttatgaatttgcagct
actcagcgaaagctactccaggaggaaagagctccagagattgaggaagaaactgaccag
cttggagaggatggtccaagtcctaggcaaatcgtagcaagtgtccaggttaaagaacag
tcggaaaatgaagaacagatagaattgtttgggcagggaagagatgaagccccagccaaa
tggaaaaccgtgagacagtccatgctcttgccacttgagagccagtgttcagacagggag
gaggcggtagaggcccagaaggaagcactggatcattccagctcctctaacccttctcag
ggctgccaggcagagagaagggaaggggtctttttgtattcagttgatgttgatgatgat
gaacagcccttcgcatcaactccaggaggataccctgaaccgtcccaaataacgagtgat
ctcaaggaaggcaacagcactgtcggggaaaaggggacggagagttcctgtccctctact
caccagcaaacacccccatctcgccggtgcttcttcccatcacagagccctccaggcagg
agtccccgccaaccacaccctcgccttcatcgcacaactgcctcctccccaccaaagccc
cagtcacagggcagagcttccagggtggactcccaggactcgccactgaagcagagaagg
ggccggagccttctcacattacttgatgatccaggctgccagaaaggcaaagaacgtggc
tccatgttggaatgcagaaataaaggtgtcctgatctccccagaaaagtctctatccatt
gacctaacccaagcaaaacctagtcatcggagctccagatctcagaattctctgtctagc
gtgaacagagaagatgagattatccttttattggattcagacgaagagttggagctagaa
caaagcaaaataaagtcagtttttaatagtcccccagaagaaggaaaagttctaaaagtt
agccccaaatcctctgaactgttctctgtcattgacgtcgatgcagatcaagaactttcc
caaagcccaccaagaagagacgccacactgcagcaggaggaggggggagcatcagggaac
cagggctctgtggatggcaaagagactccccagctcttccgtgaccctgaaagcagccct
gatgaggctagcaccacagatacctcatggctggtgcccgccaccccactggccagcaga
agccgagactgttcatcacagacccaaatcatgggcctcaagtccaggacttcagtggac
caaacggctcagctcaagcccagggccccgttagaaaacaaggatggacctgaagctgcg
aataagttttcagtaatcatgccccagacatcgtcgtcctgcctggtccctgttgctcct
ggaagccctgacagcagaagtcagatctacagaagtccttccagtccccatcctcggcgc
cacaagcacttttctcctctgtctccctgtccgacctcaggagccctcactgatttcagc
aggcagttccagaattgctcgccacctaggccgagcctgctgaaccaggccacagcgagt
gaagtggtagaggtggaggacagtgaagatgagcaggagatggcctcccgccaggctagc
agcagcctcctgctggacagcaatccccccattccatctgatgacagctgttggcatgtc
gaacccctctcaccaattccaattgaccatttgaacctcgagcgaaccggacccctaagc
accagtagcccaggtggtaaggtgggggaagtctggcacaatagtgactgccactccccg
gcactcctgggcacgacccccatccgaggaagctgcactggccgaggaagttgcactggc
ggtaggaagtctcaagagaaatctcctagggccggctcccctgggagcagcaggctgagc
ttcttgaattcagctctgtgggatgattgggatgaagaacagaagtctccagaggtgctt
cctctggcccagacaccgagcgctgatcgagctcagaaatcagaagggttaaagaagcca
agtgctaatcggaggaagaacttgcccccaaaagtgcccataacaccaatgccacagtat
tccatcatggagacgcccgtactgaagaaggaactagatagatttggggtccgtcctctg
cccaaacgccagatggttctgaaactgaaggagatattccagtacactcaccagacactg
gaatcagactctgaggacgagagccaatcctcacaggtgctcctggaggctccttgcagc
cagacccacaccaccaagacctctaaggcttcaagggcagctgggtgcaccagcctcgag
gccacttctgaccttgttccccaaaggtccaaggaatctgctaagagcaaaggcccccaa
catcgaaagcagcagccaggtggaagcatctccccgcggagcatgttaccagctgaggaa
gtgcccctaagccctgatggtgacacccagctcccggcctctcagaaatccatgaccact
tctgtggacagcggtgacagctcctttagctcacaaagttcttcttcctgtgagtttgga
gtggcctttgagtctgcaggagaagatgagggtgaggatggggtcagtgcttcacaggca
gctgtccaagcagtgaccacagaggaggcagtgaggcgctacatccgctctacgccagca
ctgtaccgcaaggtgctgctctaccagccctttgagctggcagagctgcaggccgagctg
aagcaacagggcatccgcatgaccacggggaagctgctggacttcctggatgcccactgc
attaccttcaccactgctgcagcccggaaagagaagctcgagaggaagaggcagcagcct
gtaggcaagaagaagcgaggcaaaaccaaccagcccgtcccccgctccccacccatggcc
atcagcagtctgtga
DBGET
integrated database retrieval system
