Pteropus vampyrus (large flying fox): 105304204 Help Entry 105304204         CDS       T07815                                  Symbol LIG1 Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism pvp  Pteropus vampyrus (large flying fox) Pathway pvp03030   DNA replication pvp03410   Base excision repair pvp03420   Nucleotide excision repair pvp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pvp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     105304204 (LIG1)    03410 Base excision repair     105304204 (LIG1)    03420 Nucleotide excision repair     105304204 (LIG1)    03430 Mismatch repair     105304204 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pvp03032]     105304204 (LIG1)    03400 DNA repair and recombination proteins [BR:pvp03400]     105304204 (LIG1) Enzymes [BR:pvp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105304204 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      105304204 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      105304204 (LIG1) DNA replication proteins [BR:pvp03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     105304204 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      105304204 (LIG1) DNA repair and recombination proteins [BR:pvp03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      105304204 (LIG1)    NER (nucleotide excision repair)     Other NER factors      105304204 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      105304204 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PucR DDR Motif Other DBs NCBI-GeneID:  105304204 NCBI-ProteinID:  XP_023377896 UniProt:  A0A6P6BS29 LinkDB All DBs Position Unknown AA seq 960 aa AA seqDB search MQRSIMSFFYPKTEGKAKKPEEETPSSVGETEPPPKAALKERNGMVPESDSPVKRPGRKA ARVLGSEGEEEDGARTPPWGQVGPGALPMCSGENYLVFTTASNGNPASQKYSVREKEERD LILKAEIPRAKAETPTESPPESERAEEKEAEEEDLPMVPPELPEACEAEPPAGSGAEPGA AVGQGLREEDRAKPLARGPKTLNSFFAPRKPAAKTEVREEGSGTPRKEAPEGPPEPSGYN PAQNSYHPVEDACWKQGQKVPYLAVARTFEKIEEVSARLRMVETLSNLLRSVVALSPSDL LPILYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSR STQRLMLPPPTLTASGVFAKFRDIARLTGSASTAKKIEIIKGLFVACRHSEARFIARALS GRLRLGLAEQSVLAALAQAVSLTPPGQGFPPAVVDAGKGRTAEARKTWLEEQGMILKQTF CEVPDLDRVVPVLLEHGLERLPEHCRLSPGVPLKPMLAHPTRGVGEVLKRFEEAAFTCEY KYDGQRAQIHLLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTSFILDAEAVAWDR EKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFM ETEGEFVFATSLDTKDTDQIAEFLEQSVRDSCEGLMVKTLDVDATYEIAKRSHNWLKVTV PTGRPTEPSVQKSPLRGGGLQAPHFTPDECGSLSRPPPPRSRPRFLPWTRKLGSVEAVMT LVTGWAGGQGRGRRGAGAPPPRGTRSHPPGSPPPSTMVSMDTAWARPAPDRPPPPQLGTG FSDEALEEHHHRLQALVLPSPRSYVRADGAVAPDHWLEPSAVWEVKCADLSLSPIYPAAR GLVDSEKGVSLRFPRFIRVREDKKPEEATTSAQVACLYRKQSQVQNQQGSHSESDPEDFY NT seq 2883 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagcatcatgtcatttttctaccccaagacagagggcaaagcgaagaagcca gaggaggagacgcccagcagcgtcggggaaacagagcccccgccgaaggcggcgctgaag gagaggaacggaatggtgcctgagagcgactctccggtgaagaggccggggaggaaggcg gcccgtgtcctgggcagtgagggggaggaggaggacggagcccgcacgcccccctgggga caggtaggccctggtgctctgcccatgtgttctggggaaaactacctggtttttaccaca gccagcaatggaaacccagcttcgcagaaatacagcgtcagggaaaaggaggaacgcgac ctgatactgaaggctgaaataccccgagctaaagcagagaccccaacagaaagtccccca gaatcggaaagggccgaagagaaagaggcagaagaggaggacctgcccatggtgcccccc gagctccccgaggcctgcgaagcagagcccccggcaggaagcggtgcagagcccggggcg gccgtgggccaggggctgcgggaggaggaccgggcgaagcctctcgccaggggtcccaag acgctcaacagtttcttcgctccccggaagccggcagccaaaacagaagtgagagaagag gggtctggcaccccaaggaaggaggcgcccgagggcccgccggagccatctggctacaat cctgcccagaacagctaccatcccgttgaagacgcctgctggaagcagggccaaaaggtc ccttatctggccgtggcccggacgttcgagaagatcgaggaggtttcggctcggctccgc atggtggagacgctgagcaacctcctgcgctccgtggtggccctgtcgccgtctgacctc ctccccatcctctacctcagcctcaaccacctggggccgccccagcagggcctggagctt ggcgttggggacggtgtccttctcaaggcagtggcccaggccacaggtcggcaactcgag tctgtccgggctgaggcagccgagaagggtgacgtgggcctggtggctgagaacagccgc agcacccagaggctcatgctgcccccgcccaccctcaccgcctctggggtcttcgccaaa ttccgggacatcgcccggctcactggcagcgcgtccacagccaagaagatagagatcatc aaaggcctgtttgttgcctgccgccactcggaagcccggttcatcgccagagccctgagc ggacggctgcgcctcgggctagcagagcagtcggtgctggccgccctcgcccaggccgtg agcctcacgccccctgggcaaggcttccccccagccgtggtggatgctgggaagggcagg acagcagaggccaggaagacgtggctggaggagcaaggcatgatcctgaagcaaacgttc tgcgaggtgcctgacctggaccgcgttgtccctgtgctgctggagcacggcctggagcgg ctcccggagcactgcaggctgagtccaggggtccccctgaagccaatgttggcccacccg acccggggcgtcggcgaggtcctgaagcgctttgaggaggcggctttcacctgcgagtac aaatatgatgggcagagggcacagatccacctcctggaaggcggggaggtgaagatcttc agcaggaatcaggaagacaataccgggaagtaccccgacatcatcagccgcatccccaag atcaaactcccgtccgttacgtccttcatcctggacgccgaagctgtggcctgggaccgg gagaagaagcagatccagccgttccaagtgctcaccacccgtaaacgcaaggaggtggac gctgcggagatccaggtgcaggtgtgtctgtacgcctttgacctcatctacctcaatgga gagtccctggtgcgtgagcccctctcccgacgccggcagctgctccgggagaacttcatg gagacggagggcgagtttgtcttcgccacctccctggacaccaaggacacggaccagatc gccgagttcctggagcagtcggtgagagactcctgcgaggggctgatggtgaagaccctg gacgtcgacgccacctacgagatcgccaagaggtcgcacaactggctcaaggtgactgtc cccaccggccgtcccacggagccctcggtccagaagtctcccctgcggggcggtgggctg caggccccgcacttcaccccagatgagtgcgggagcctttctcgccccccgccacctcgc agccgtccccgctttctcccctggacaagaaaactgggcagcgtggaggctgtgatgacc ctggtcacaggctgggcgggaggtcagggccgggggagacgaggggcgggggcgcccccg ccgcgggggactcgctcccatccgcctgggagcccccctccttccaccatggtttccatg gataccgcctgggcacgcccagcccctgaccgcccgcctcccccgcagctgggaaccggc ttcagcgacgaagcgctggaggagcatcaccaccgcctgcaggccctggtgctgcccagc ccgcgctcctacgtgcgggcggacggggccgtggcccccgaccactggctggagcccagc gccgtgtgggaagtcaagtgcgccgacctctctctgtcccccatctaccccgccgcccgc ggactggtggacagcgagaagggcgtctccctgcgcttccctcggttcatccgcgtccgc gaagacaagaagccggaggaggccaccaccagtgcccaggtggcctgtctgtacaggaag cagagtcaggttcagaaccagcaaggctcacactcggagtccgacccggaggatttctac tag

DBGET integrated database retrieval system