Pteropus vampyrus (large flying fox): 105305090
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Entry
105305090 CDS
T07815
Symbol
UPF3A
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03013
Nucleocytoplasmic transport
pvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105305090 (UPF3A)
03015 mRNA surveillance pathway
105305090 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvp03019
]
105305090 (UPF3A)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105305090 (UPF3A)
mRNA cycle factors
P-body specific factors
105305090 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
105305090
NCBI-ProteinID:
XP_011377840
UniProt:
A0A6P3R9X4
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MRSEKEGVAGPRAAVAARGQSRREKPSSVLVQFRRESPQREPGALLASSSSCGGSAGKPR
EEKRTVLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFFTADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDNKGLEYPAVVEFAPFQKIAKRRLKKKDAKTGSVENDLEYKRF
LEAYSVEEEKTSTNPETLLGDIEAKTREHFARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRKRREEERCKRKEADKQKKTAEKEVRIKLLKKPEKGGEAATEKTEE
QGEEIDAGDGQREACPSCAVVKAKPWESTXDRRREKSQNDSGKEQKHMERKLGEKELETQ
RYHLDDNRKLKAHYEFDKFSRRNEEEPEWGKRFSPDRGRTGSQDSGILIEAAERPEKEQK
SEGDLAPKKERVGNRDWPALQLYQPGACMRIQGCGGRYSEEGHDGRRAEAEDSTGAGSKK
SEEVE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggagggtgtcgctggccctagggcggccgttgctgcgcggggtcag
agccggagggagaagccgtcgtctgtgttagttcagttccgccgggagtcgccgcagcga
gagcccggggcgctgctggcttcgtcctccagctgcgggggcagcgcaggcaaacctcgc
gaggagaagaggacggtattgagcaaggtggtgatccggcgccttcctcccagcctcacc
aaggaacagctggaggagcagctccacccactacctgcacacgattactttgagttcttt
actgcggatctcagtctttatcctcatctctactcaagagcctacattaattttagaaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttcattgacaataaa
ggccttgaatatcctgcagtggtagagttcgctccgttccagaagatagccaaaaggagg
ctaaagaaaaaagatgccaaaactggaagcgttgaaaatgatctggaatataagaggttt
ttagaagcttactctgtggaggaagagaaaactagtaccaatcccgaaactcttttggga
gacatagaagcaaagacaagagaacattttgctagaagaaccacacctcttttggaatac
attaaaaatagaaaattagaaaagcagagaattcgagaagagaagcgagaagagcggagg
aggagggaattggaaaagaaacgtttacgggaagaagaaaaaagaaagagaagagaggag
gaaagatgtaagagaaaagaagcagacaaacaaaagaaaactgctgagaaagaagtaagg
attaagcttcttaagaaaccagaaaagggaggggaagcagctactgagaaaacggaagaa
caaggagaggaaattgatgctggagatggacaacgggaagcctgccctagctgtgctgtt
gtgaaggccaagccctgggagagcacataggacaggcgcagggaaaagtcacaaaatgac
agtggtaaagagcaaaagcatatggagagaaaattgggagaaaaagaacttgaaacacaa
agatatcacttggatgacaacagaaagcttaaagctcactatgagtttgacaagttttca
agaagaaatgaagaagagccggaatgggggaaaagattcagcccagacagagggaggaca
gggagccaggacagtggcatccttatagaagcagcagagagaccagagaaagagcagaag
agtgagggggacctggcacccaaaaaggaacgtgtgggaaacagggactggccggccttg
cagctgtaccagccaggagcttgcatgagaatacagggatgtggtggaagatactctgaa
gagggccacgatggaaggagggctgaggcagaagattcaacaggggctggttccaagaag
agcgaagaggtggagtga
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