Pteropus vampyrus (large flying fox): 105305150
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Entry
105305150 CDS
T07815
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
105305150 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvp03036
]
105305150 (DICER1)
Chromosome and associated proteins [BR:
pvp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105305150 (DICER1)
microRNA pathway
RISC loading complex
105305150 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
105305150
NCBI-ProteinID:
XP_011377899
UniProt:
A0A6P6BUJ2
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDVSRLGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKEKWNQEFAKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFMDRSGLYERLLMELEEALNFVSDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETE
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPRPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISIANSSSAENDNYCKHSTIVVPENAAHQGANR
TSSLENHDQMSVNCRMLFNESPGKLPIEVSTDLTAINGLSYNRNLANGSYDLANRDFCQG
NQLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPVTA
AMPGTAEAVPTLEDRAGSKQSPSPGRSSRTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGRLDDDLEEEEEEGLTWRAPKEDTEYEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSADFEDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEESCGVDAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVVKRTDRETATCPTRESFGSQQKSLSGGR
AAACAASPRSPVFKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgctcgaagcagctctggaccataatacc
atagtctgtctgaacactggctcagggaagacgtttatcgcagtgctactcactaaagag
ctgtcctatcagatcaggggcgacgtcagcagactcgggaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagaaatggaaccaa
gagtttgctaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccgtcatgccct
cgtattttgggactaactgcttccattttaaatgggaagtgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattctcaagagtaacgctgaaactgcaactgacttg
gtggtcttagacagatacacttctcagccttgtgagatcgtggtggactgtggaccgttt
atggacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
gtcagtgactgtaacatttctgttcattcaaaagaaagagattctactttaatttctaaa
cagatactgtcggactgtcgtgcggtgttggtagttctgggaccctggtgtgcagataaa
gtcgctggaatgatggtaagagaactgcagaaatacatcaagcacgaacaggaggagctg
cacaggaaattccttttgtttacagacactttcctacggaaaatacatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactg
cttgaaatcctacgcaaatataaaccatatgagcgacaacagtttgaaagcgtggagtgg
tacaataataggaatcaggataattatgtgtcttggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaggagaaaccagagacaaattttccttctccatttaccaat
attttatgtggaattattttcgtggaaagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaggatccagagctggcttacatcagcagcaattttataact
ggacatggcatcggcaagaatcagcctcgtaacaaacagatggaagcggaattcagaaaa
caggaagaggtgcttaggaaatttcgagcacatgagactaacctgcttattgcaacaagt
attgtggaggagggtgttgatataccaaaatgcaacttggtggttcgttttgatttgccc
acagagtatcgatcctatgttcaatctaaagggagagcaagggcaccgatctctaattat
ataatgttagcagatacagacaaaataaaaagttttgaagaagacctgaaaacgtacaaa
gctattgaaaagatcttaagaaataaatgttccaagtcagttgatactggtgagactgag
attgagcccgttgtggatgatgatgatgttttcccaccatacgtgttgaggcccgatgat
ggtggtccacgagtcacaatcaacacagccatcggacacatcaatagatactgtgctaga
ttaccaagtgatccgttcactcatctggcccctaaatgcagaacccgagagctgcctgat
gggacattttattcaactctctatctgccaattaactcacctcttcgagcctcgattgtt
ggtccaccgatgagctgtacacgcctagccgaaagagtcgtagcgctcatttgctgtgaa
aaactgcacaaaattggggaactggatgaccatttgatgccagttgggaaagaaaccgtt
aaatatgaagaagagcttgacttacatgatgaggaagagaccagtgtcccaggcagaccg
ggctccacaaaacgcaggcagtgctaccccaaagcaattccagaatgtctgagggatagc
taccctagacccgatcagccctgttacctgtatgtgatagggatggttctcacgacaccg
ctgcctgatgagctcaacttcagaaggcggaagctttatccccccgaggatactacacga
tgcttcggaatactgacagccaaacccatacctcagattccgcactttcccgtgtatact
cgctctggagaggtgaccatatctattgagttgaagaagtctggtttcacattgtctcta
caaatgctcgagttgatcacaagactccaccagtatatattctcacatattcttcgcctt
gaaaaacctgcactagagtttaaacccacagacgctgattcggcttactgtgttctacct
ctgaatgttgttaatgactccagcactttggacattgactttaagttcatggaagatatt
gagaaatctgaagctcgcataggcattcccagtacaaagtattcaaaagaaacacccttt
gtttttaaattggaagattaccaggatgcagtgatcattccaagatatcgaaatttcgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttactccactgagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaagtataaccttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
acacctcgccatttgaatcagaaggggaaagctcttcctctgagcagtgctgaaaaaagg
aaagccaaatgggaaagtctgcagaacaaacagatactggttccagaactctgtgctata
catccaattccagcatcactgtggagaaaagcagtctgtctccccagcatcctttatcgc
cttcactgccttttgactgcagaggagctaagagcccagacagccagcgatgctggcgtg
ggagtcagatcacttcctgtggattttagataccctaacttagacttcggatggaaaaaa
tctatcgacagcaaatctttcatctcaattgctaactcctcttcagcggaaaatgataat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaatcga
acctcctctctagaaaatcatgaccaaatgtctgtgaactgcagaatgttattcaatgag
tcacctggtaagctcccaattgaagtttcaacagatctgacagcaattaacggtctttct
tacaatagaaaccttgccaatggcagttatgatctagctaacagagacttttgccaagga
aatcagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaattatgagaaccagcccaagcccagcgatgaatgtactctactgagt
aataaataccttgatggaaatgctaacaaatctacctcagatggaagtcccgtgacggcc
gcgatgcctggcactgcagaggctgtccccacgctcgaggacagggcgggttctaagcag
agcccttctcccgggcgctcctcgaggactctcggcccaaatcctgggcttattcttcag
gccttgaccctttcgaatgctagcgatgggttcaacctggagcgactcgagatgcttggc
gactcctttttaaagcatgccatcaccacctacctgttttgcacttatcctgatgctcat
gagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtaccggctt
gggaagaagaaggggctgcccagccgcatggtggtgtcgatattcgatccccccgtgaat
tggcttcctcctggttatgtagtaaatcaagacaaaagtaacacagataaatgggaaaaa
gacgaaatgacaaaagactgcatgctggctaatggcagactggacgacgacttggaggag
gaggaggaggagggcctgacgtggagggccccgaaggaggacaccgagtacgaggacgac
ttcctggagtacgaccaggagcatatcaagttcatagacaacatgctgatggggtcggga
gccttcgtaaagaaaatttctctctctcctttttcaaccaccgattctgcatatgaatgg
aaaatgcccaaaaagtcctccttaggtagcatgccgttctcggcggattttgaggatttt
gactatagctcctgggatgcgatgtgctatctggaccccagcaaggccgtggaggaggac
gactttgtggtggggttctggaatccgtcagaggagagctgcggcgtggacgcggggaag
cagtccatttcctacgacctgcacacggagcagtgcatcgccgacaagagcatcgcggac
tgcgtggaggccctgctgggctgctacttaaccagctgcggcgagagggccgctcagctt
ttcctctgctcgctggggctgaaggtgctcccggtcgttaaaaggactgaccgggaaacg
gccacatgcccgacgcgggagagtttcggcagccaacaaaagagcctttcagggggccgc
gctgccgcctgtgcagccagcccccgctcccccgtgtttaaagacttggaatacggttgt
ttgaagattccaccacgatgtatgtttgaccatccagatgcagataaaacgctgaatcac
ctgatatcgggtttcgaaaatttcgaaaagaaaatcaactacagattcaagaataaggct
taccttctgcaggcttttacacatgcctcctaccactacaatactattactgattgctac
cagcgcttagaattcctgggggatgcgattttggactacctcataaccaagcacctttac
gaagacccgcggcagcactccccaggggtcctgacggacctgcggtctgctctggtcaac
aacaccatcttcgcgtcgctggcggtgaagtacgactaccacaagtacttcaaagcggtg
tcccctgagctcttccacgtcatcgatgacttcgtgcagtttcagcttgagaagaacgaa
atgcaagggatggattctgagcttaggagatctgaggaggatgaagagaaggaagaggat
attgaagttccaaaggccatgggggatatttttgagtcacttgctggtgccatttacatg
gatagtgggatgtcactggagatggtttggcaggtgtactatcctatgatgcggccgcta
atagaaaaattttctgcgaatgtgccccgttcccctgtgcgagaattgcttgaaatggaa
ccagaaactgccaaatttagcccggccgagagaacttacgatggcaaggtcagggtcacc
gtggaagtggtgggaaaggggaaattcaaaggtgtcggccgaagttacaggatcgccaag
tctgcagcagccagaagagccctacgaagcctcaaagctaatcaacctcaggttcccaac
agctga
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integrated database retrieval system
