Pteropus vampyrus (large flying fox): 105305662
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Entry
105305662 CDS
T07815
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03082
ATP-dependent chromatin remodeling
pvp04714
Thermogenesis
pvp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105305662 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105305662 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105305662 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvp03021
]
105305662 (SMARCA4)
03036 Chromosome and associated proteins [BR:
pvp03036
]
105305662 (SMARCA4)
Transcription machinery [BR:
pvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105305662 (SMARCA4)
Chromosome and associated proteins [BR:
pvp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105305662 (SMARCA4)
Chromatin remodeling factors
BAF complex
105305662 (SMARCA4)
PBAF complex
105305662 (SMARCA4)
GBAF(ncBAF) complex
105305662 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SnAC
Helicase_C
Bromodomain
HSA
QLQ
ResIII
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
105305662
NCBI-ProteinID:
XP_023379168
UniProt:
A0A6P6BVM9
LinkDB
All DBs
Position
Unknown
AA seq
1533 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPSQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPASGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQVPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEEEEEEQPQPSQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQVKAAGPLGGGATYQPWRLKSS
IYPQSRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFD
LFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHR
KEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKD
DESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKEL
PEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQ
SVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRR
RPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacctctgggtggaactcctcggccaggcccttctccaggccct
ggcccatctcctggagccatgttgggccctagcccgggtccctcccccggctctgcccac
agcatgatggggcccagcccggggcctccctcagcaggacaccccatcccaagccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagccaatggagtccatgcat
gagaaaggcatgtcggatgacccccgctacaaccagatgaaggggatggggatgcggtca
gggggccacacaggcatggggcccccgccaagccccatggaccagcactcccaaggttac
ccctcacccctgggtggctctgagcacgcttctagtccggttccagctagtggcccagcc
tcgggccctcagatgtcatctgggccaggaggagccccactggatggtgctgaccctcag
gctttggggcagcagaaccggggcccaactccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccaggggacagcccctgcctgaccacctg
cagatggcagtgcagggcaagcggccgatgcctgggatgcagcagcaggtgccaacacta
cctccaccctctgtgtctgcaacaggacctggccccggccccggccccggccctgggcca
ggcccaggaccagcgcctccaaattacagcaggcctcatggcatgggagggcccaacatg
ccccccccaggaccctcaggtgtgccccctgggatgccaggccagccccccggagggcct
cctaagccctggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatcccccctcagcctacgggccgcccctcacctgcgcccccagccgtcccgcct
gctgcctcccctgtgatgccaccgcagacgcagtcaccagggcagccagcccagcctgcc
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaaaccgcggggc
ctggaccctgttgagattctgcaggagcgggagtacaggctgcaagctcgcattgctcat
cgaattcaggaacttgaaaaccttcccgggtcgctggccggggatttgcgaaccaaagca
accattgagctcaaggccctcaggctgctgaacttccagaggcagctacggcaggaggtg
gtggtgtgcatgcggagggacacggcgctcgagacggccctcaatgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggctcgcatcaccgagaagctggagaagcagcag
aagatcgagcaggaacgcaagcgccggcagaagcaccaggaatacctcaacagcattctt
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaattcagaagctc
acgaaggcagtggccacgtaccatgccaacacagagcgggaacagaagaaggaaaacgaa
agaatcgagaaggagaggatgcggaggctcatggcggaagatgaggaagggtaccgcaag
cttatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacggatgagtat
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggttgccaaggagaag
aagaagaagaaaaaaaagaagaaggcagaaaacgcagaaggacaaacgcccgcaattgga
cctgatggcgaggaggaggaggaagagcagcctcagccatcacagcctcccaccctgccc
gtggaggagaagaagaagattccagatccagacagtgacgacgtctccgaggtggacgcc
cggcacatcattgagaatgccaagcaagatgtcgatgatgagtacggcgtgtcccaggca
ctcgctcgtggcctgcagtcctattatgctgtggctcatgccgtcactgagagggtggat
aagcagtcggcgcttatggtcaacggtgtcctcaaacagtaccagatcaagggtttggag
tggctggtgtccttgtacaacaacaacctgaacggcatcctggccgacgagatgggtctg
ggaaagaccatccagaccatcgcgctcatcacatacctcatggagcacaagcgcatcaac
gggcccttcctcatcatcgtacctctctcaacgctgtcaaactgggcatacgaatttgac
aagtgggccccctctgtggtgaaggtgtcgtataagggctctccagcagccagacgggct
tttgtccctcagcttaggagtggcaaattcaatgtcttgctaacgacatacgagtacatc
attaaagacaagcacattcttgcaaagatccgttggaagtacatgatcgtggacgaaggc
caccgcatgaagaaccaccactgcaagctgacccaggtcctcaacacgcactacgtggcc
cctcgccgcctgctgctgacgggcacaccgctacagaacaagctccctgagctctgggcg
ctccttaacttccttctgcccaccatcttcaagagctgcagcaccttcgaacagtggttt
aatgcgcccttcgccatgaccggagagaaggtggacctgaacgaggaggagaccatcctt
atcatccgccgtctccacaaagtgctgcgacccttcctgctccggaggctcaagaaagag
gtcgaggctcaattgcccgagaaggtggagtacgtcatcaagtgcgacatgtctgccctg
cagcgtgtgctctaccggcacatgcaggccaagggggtgctgctgaccgacggttccgag
aaggacaagaagggcaaaggtggcaccaagaccctgatgaacaccatcatgcagctgagg
aagatctgcaaccacccgtacatgttccagcacatcgaggagtcattttccgagcacctg
ggctttactggtggcattgtccaagggctggacctctaccgagcctcggggaaattcgag
ctcctagatagaattctgcccaaactccgtgccaccaaccataaagtgctgctcttctgt
cagatgacctccctcatgacgatcatggaagattattttgcttatcgtggctttaaatac
ctcaggcttgatggaaccacaaaagccgaagaccggggcatgctgctgaaaaccttcaac
gagcctggctctgagtacttcatcttcctgctcagcacccgggccggggggctgggctta
aacctccagtcggctgacactgtgatcattttcgacagtgactggaacccccaccaggta
aaagctgctggccccctgggaggaggggccacctaccagccctggagactgaagtcctct
atttatccacagagcagacactgcagcacgggcagcggcagtgccagcttcgcccacact
gcccctccgccagcgggcgtcaaccccgacttggaggagccacctctaaaggaagaagac
gaagtgcccgacgacgagaccgtgaaccagatgattgcccggcacgaggaggagttcgac
ctgttcatgcgcatggacctcgaccgcaggcgtgaggaggcccgaaaccccaagcggaag
ccgcgcctgatggaagaggatgagctgccctcatggatcatcaaggacgatgctgaggtg
gaacggctgacttgtgaggaggaggaggaaaagatgtttggccgcggctcccgccaccgc
aaggaggtggactatagcgactcgctgactgagaagcagtggctcaaggccatcgaggag
ggcacgctggaggagatcgaagaggaggtccggcagaagaaatcatcacggaagcgcaag
cgggacagcgacgccggctcctccaccccgaccaccagcacccgcagccgcgacaaggac
gacgagagcaagaagcagaagaagcgcgggcgaccgcccgctgagaagctctcccccaac
ccgccaaacctcaccaagaagatgaagaagatcgtggatgccgtcatcaagtacaaggac
agtagtagtggacgtcagctcagcgaggtgttcatccagctgccctcccgcaaagagctg
ccggagtactacgagctcatccgcaagcctgtggacttcaagaagattaaggagcgcatc
cgcaaccacaagtaccgcagtctcaacgacctggagaaggacgtcatgttgctgtgccag
aacgcccagaccttcaacttggagggctccctgatctacgaagactccattgtgctgcag
tccgttttcaccagcgtgcggcagaaaatagagaaagaggatgacagcgaaggcgaggag
agcgaggaggaggaagagggcgaggaggaaggctcggagtccgaatcccgctcggtcaaa
gtgaagatcaagctgggccggaaggagaaggcacaggatcggctgaaggggggccggcgg
cggccaagccgtgggtcccgggccaagccagtggtgagcgacgatgacagtgaggaggag
caggaggaggaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system