Pteropus vampyrus (large flying fox): 105305811
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Entry
105305811 CDS
T07815
Symbol
MTREX
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105305811 (MTREX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvp03019
]
105305811 (MTREX)
03041 Spliceosome [BR:
pvp03041
]
105305811 (MTREX)
03009 Ribosome biogenesis [BR:
pvp03009
]
105305811 (MTREX)
03016 Transfer RNA biogenesis [BR:
pvp03016
]
105305811 (MTREX)
Enzymes [BR:
pvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105305811 (MTREX)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105305811 (MTREX)
Spliceosome [BR:
pvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105305811 (MTREX)
Complex C
U4/U6.U5 tri-SnRNP related factors
105305811 (MTREX)
Ribosome biogenesis [BR:
pvp03009
]
Eukaryotic type
Pre-60S particles
Helicases
105305811 (MTREX)
Transfer RNA biogenesis [BR:
pvp03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105305811 (MTREX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
105305811
NCBI-ProteinID:
XP_011378922
UniProt:
A0A6P3RC15
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MADTFGDELFSVFEDDSTTAPGTKKDKEKEKGKWKGPPGSAEKAGKRLDGKLQSESTNIA
KTKRDADFEGTDEPIFGKKPRVEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADE
DYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALR
EKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGS
EVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLH
KQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGD
QKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMV
EEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALF
ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVD
EKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPG
VVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLV
KVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSRESLKNSATEAAKPAKP
DEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPI
DDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELK
KARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDL
SAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLS
SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE
NKFAEGITKIKRDIVFAASLYL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactttcggggatgagctcttcagcgtgttcgaggacgactcgaccactgcg
cccggaaccaaaaaagacaaggagaaggagaaggggaaatggaaggggccgccagggtct
gcagaaaaggccgggaaacgtcttgatggtaaattacaatcagagtcaaccaatattgca
aaaaccaagagagatgcagatttcgagggtacagatgaacccatttttggaaagaagccc
agggtagaagagtcaataactgaagacttaagtttggcagacttgatgcccagagtcaag
gtacaatcagttgaaactgttgaagggtgtacacatgaggttgcacttcctgcagatgaa
gattatttaccacttaaacctcgagttggaaaagctgcaaaggaatacccattcattctt
gatgcttttcaaagagaagccattcagtgtgttgataataatcagtctgttttagtatct
gcacatacatcagcaggaaaaactgtatgcgctgagtatgccattgcattggccttaagg
gaaaaacagcgtgtaatatttactagcccaattaaggctttgagtaaccagaaataccgt
gaaatgtatgaagaatttcaagatgttggtctgatgacgggagatgttactattaatcct
acagcatcttgccttgttatgaccacagagattttgagaagtatgctgtacagaggttct
gaagttatgcgagaagttgcttgggttatatttgatgaaattcattacatgagagattca
gagcgtggtgtggtatgggaagaaactatcattttacttccagataatgttcactatgtc
tttctttcggctactattccaaatgcccgacagtttgctgaatggatttgccatttacat
aaacagccttgtcatgtaatttacacagattatcggcctactccattgcagcactacatt
tttccagctggaggggatggcctgcaccttgtagttgatgaaaatggtgacttcagagaa
gataattttaataccgcaatgcaagttcttcgagatgctggtgatttggcaaaaggagat
cagaaggggcggaaaggaggaacaaaaggaccatcaaatgtgttcaagattgtgaagatg
attatggaaaggaattttcaacctgtaattattttcagttttagtaagaaagattgtgaa
gcctatgcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggtc
gaagaagtattcagtaatgcaattgactgcttgtcggatgaagataaaaagctccctcag
gttgaacatgtacttcctcttttgaagcggggaattggtattcaccatggtggtttactt
cctattttgaaagaaactatagaaattcttttttctgaaggattgataaaggccttattt
gccacagagacttttgctatgggaattaacatgccagctagaactgttttatttacaaat
gcccgaaaatttgatgggaaagatttccgatggatttcctcgggtgaatatattcaaatg
tctggtcgtgctggaagaagaggaatggatgatagaggaattgtaattcttatggtagat
gaaaagatgagcccaacaattggaaaacaattacttaagggctcagctgatcctctaaat
agtgcttttcatttgacctacaacatggttttgaacttactacgtgtagaagaaatcaat
cctgaatacatgttggaaaaatccttctaccagtttcagcattatagagcaattcccgga
gtagtagagaaggtaaagaactcagaagaacagtataataaaatagtaataccaaatgaa
gaaagtgtagtcatctattataagattagacagcagcttgccaaactgggtaaagaaatt
gaagaatatattcacaaaccaaaatattgcttaccatttctacaaccaggtcgtttggta
aaggtaaagaatgaaggagatgattttggctggggagtagtggtgaatttctcaaaaaag
tcaaatgttaagcctaattctggtgaactggatcctttatatgtagtagaagtactgctg
cgctgtagcagagaaagcttaaaaaattcagctactgaggctgcaaagccagctaaacct
gatgagaaaggagagatgcaggttgttccagttttggtgcatctcctgtctgctatcagc
agtgttagactttacattcctaaagaccttcgacctgtggacaatagacagagtgtttta
aaatcgatacaggaagttcagaaacgttttcctgatggtgttcctttattagatcctatt
gacgatatgggcattcaggatcaggggctgaaaaaagtcatccagaaagtagaggctttt
gagcatcgaatgtattctcatccacttcacaatgatccaaatttggaaactgtgtataca
ctttgtgaaaaaaaagcacagattgcaatagatattaaatctgcaaagcgagaactaaag
aaagcaagaacagtcctacaaatggatgagctcaaatgtcgcaaacgtgttttaaggaga
ttgggatttgccacttcttctgatgtcatagagatgaaaggacgtgtggcttgtgaaata
agcagtgctgatgagctccttctaactgagatgatgtttaatggccttttcaatgaccta
tctgcagaacaggcaacggcactactaagctgctttgtgtttcaggagaattctagtgag
atgcccaaattaacagagcagttagcaggaccacttcgtcaaatgcaggaatgtgctaaa
cgaattgcaaaagtttcagcagaagcaaaattggaaattgatgaggaaacttacctaagc
tcattcaaacctcacttaatggatgtagtatatacctgggcaactggagctacatttgcc
catatctgcaaaatgacagatgtctttgaaggcagcataattcgatgtatgaggcgcctg
gaagaattgcttcgacaaatgtgtcaagcagcaaaagccattggaaacactgagctggaa
aataaatttgcagaaggaatcaccaaaatcaagagagatattgtgttcgctgccagcctt
tacttatag
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