Pteropus vampyrus (large flying fox): 105307017
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Entry
105307017 CDS
T07815
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105307017 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvp04040
]
105307017 (SCN8A)
Ion channels [BR:
pvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105307017 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Lustrin_cystein
HB_ELP1
SieB
Motif
Other DBs
NCBI-GeneID:
105307017
NCBI-ProteinID:
XP_023380309
UniProt:
A0A6P6BYZ4
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYMIPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGGGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGMRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESDGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIG
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQNCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WTKVKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENVNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGEKGHVALALHTDFCQGPTTGGRSSP
GWQYFRCCLSTFRHYRQLPPLFQAFEDIYVEQRKTIRTILEYADKVFTYIFILEMLLKWT
AYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIDFVNN
KTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPDEQP
KYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNKIQGIIFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEN
ILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSN
FAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCSLEKEHPGSGF
KGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIW
EKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFT
KRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGHLAR
RGFICKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQ
KEVRESKC
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcactcctgag
tcgctggcaaacatcgagaggcgcattgctgagagcaagcttaagaaaccaccaaaagcc
gatggcagtcatcgggaagatgatgaggacagcaagcccaagccaaacagtgacctggaa
gcagggaagagtttgcctttcatctacggggacatcccacaaggcctggtcgcagttccc
ctggaggactttgacccatactatttgacgcagaaaacctttgtagtattaaacagagga
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaaccctcctgactggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgagatccatggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatt
gtgggtgccctaattcagtccgtgaagaagctgtcagatgtgatgatcctgacagtgttc
tgcctgagtgtttttgccttgattggactgcagctgttcatgggaaacctgagaaacaaa
tgtgttgtgtggcccatcaacttcaatgagagctatcttgaaaatggcaccaaaggcttt
gattgggaagagtatatcaacaataaaacaaatttttacatgattcctggcatgctagaa
cctttactctgtgggaacagttctgatgctgggcaatgcccagaaggataccagtgtatg
aaagcaggaaggaaccccaactatggttatacaagctttgacactttcagctgggccttc
ttggcattatttcgccttatgacccaggactattgggaaaacttatatcagttgacctta
cgagcagctgggaaaacatacatgatcttctttgtcttggtcatctttgtgggttctttc
tatctggtgaacttgatcttggctgtggtggccatggcttatgaagaacagaatcaggca
acgctggaggaggcagagcaaaaagaggctgaattcaaagcaatgttggagcaacttaag
aagcaacaagaagaagcacaggctgctgctatggccacatcagcaggaactgtctcggaa
gatgccatagaggaagaaggtgaagaagggggaggctcccctcggagctcatctgaaatt
tctaaactcagttccaagagtgccaaggaaagacgtaacaggagaaagaagaggaagcaa
aaggaactctctgaaggagaggagaaaggggatcccgagaaggtgtttaaatcagagtca
gaagatggtatgaggaggaagggcttccggctgccagacaacagaatagggaggaagttt
tccatcatgaatcagtccctgctcagcattcccggttctccattcctctcccgccacaac
agcaagagcagcatcttcagcttcaggggccccgggcggttccgggacccgggctcggag
aacgagtttgcggacgacgagcacagcacggtggaagagagcgacggccgccgggactcc
ctcttcatccccatccgggcgcgcgagcgccgcagcagctacagcggctacagcggctac
agccagggcagccgctcctcgcgcatcttccccagcctgcggcgcagcgtgaagcgcaac
agcaccgtggactgcaacggcgtggtgtccctcatcggaggccctggctctcacatcggc
gggcgtctcctgccagaggtgaaaatagataaggcagctaccgatgacagcgctacaact
gaggtagaaattaagaagaaaggccctggatcccttttagtttccatggaccaactggct
tcctacgggcgaaaggacaggatcaacagtatactgagtgttgttacaaatacactagta
gaagagctggaagaatctcagagaaagtgcccaccatgctggtataaatttgccaatact
ttcctcatctgggagtgtcacccctactggataaaactaaaagagattgtgaacttgatt
gttatggacccttttgtggacttggccatcaccatctgcattgttctaaatacactattc
atggcaatggagcaccatcctatgacgccacaatttgaacatgtcttgtccgtaggaaat
ctggttttcactggaattttcacagcagaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgacggatttattgtctccctcagttta
atggagctgagtctagcaaatgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaattagccaaatcctggcccacgctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgaccctggtgctggccattattgtcttcatcttc
gccgtggtggggatgcagctctttgggaagagctacaaagagtgtgtctgcaagatcaac
cagaactgtgaactccctcgctggcacatgcatgacttttttcattccttcctcattgtc
tttcgagtgttgtgcggggagtggatcgagaccatgtgggactgcatggaggtggcaggc
caggccatgtgcctcattgtcttcatgatggtcatggttattggcaacttggtggtgctg
aacctgtttctggccttgctactgagctccttcagtgcagacaatctggcagccactgac
gatgatggagaaatgaacaacctacagatctcagtaatccgtatcaagaagggtgtggct
tggaccaaagtgaaagtgcatgccttcatgcaggcccacttcaagcagcgtgaggctgat
gaagtgaaacctctggacgagctgtatgaaaagaaggccaattgtatcgccaaccataca
ggtgcagacatccaccggaatggtgatttccagaagaatggcaatggcaccaccagtggc
attggcagcagcgtggagaagtacatcattgatgaggaccacatgtccttcatcaacaat
cccaacttgaccgtgcgggtgcccattgctgtaggcgagtcagattttgagaacgtcaac
acagaggatgttagcagcgaatcggatcccgaaggcagcaaagataaactggatgatacc
agttcctctgaaggaagcactatcgatatcaaaccagaagtggaagaagtccctgtggag
cagcctgaggagtacttggatccagacgcttgcttcacagaaggtgagaaggggcacgtg
gcacttgcactgcacacagatttctgccaggggccaaccacaggtgggaggagcagccca
ggatggcagtacttccgatgttgcttgtctacctttaggcactataggcagctgccgcct
ctctttcaggccttcgaggacatctacgttgagcagagaaagaccattcgtaccatcctg
gaatacgctgacaaagtcttcacctatatcttcatcctggagatgttgctcaagtggaca
gcctatggcttcgtcaagttcttcaccaatgcctggtgctggctggacttcctcattgtg
gctgtctctttagtcagccttatagctaatgccctgggctactcggaactaggtgccata
aagtcccttaggaccctaagagctttgagacccttaagagccttatcacgatttgaaggg
atgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaatgtgctgctg
gtgtgtctcatcttctggctgattttcagcatcatgggagttaacctatttgcgggaaag
taccactactgctttaatgagagttctgaaatccgatttgaaattgattttgtcaacaat
aaaactgagtgtgaaaagctcatggaggggaataatacagaaatcagatggaagaatgtg
aagatcaactttgacaacgttggggcaggatatctggcacttcttcaggtggcaaccttc
aaaggctggatggacatcatgtatgcagctgtagattcccgaaagcctgatgagcagcct
aagtatgaggacaacatctacatgtacatctactttgtcatcttcatcatcttcggctcc
ttcttcaccctgaacctgttcattggtgtcatcattgataacttcaatcaacaaaagaaa
aagtttggaggtcaggacatcttcatgactgaagaacagaagaagtactacaatgccatg
aaaaagctgggctcaaagaaaccacagaaacccattccccgccccctgaacaaaatccaa
ggtatcatctttgattttgtcactcaacaagcctttgacattgttatcatgatgctcatc
tgccttaacatggtgacaatgatggtggagacagatactcagagcaagcagatggagaat
attctctactggattaacctggtcttcgtcatcttcttcacctgtgagtgtgtgctcaaa
atgtttgccttgaggcactactacttcaccattggctggaacatcttcgacttcgtggta
gtcatcctctccattgtgggaatgttcctggccgatataattgagaaatactttgtttcc
ccaaccctattccgagtcatccgattggcccgtattgggcgcatcttgcgtctgatcaaa
ggcgccaaagggattcgtaccctgctctttgccttaatgatgtccttgcctgctctgttc
aacatcggccttctgctcttcctggtcatgttcatcttctctatctttgggatgtccaat
tttgcttatgtgaagcacgaggcgggcatcgatgacatgttcaactttgagacatttggc
aacagcatgatctgcctgttccagatcacaacctcagctgggtgggacggcctgctgctg
cccatcctaaaccgcccccctgactgcagtctggaaaaggaacacccagggagtggcttt
aagggagactgtgggaacccctcagtgggcatcttcttctttgtaagctacatcatcatc
tcctttctaattgtcgtgaacatgtacattgccatcatcttggagaacttcagtgtagcc
acagaggaaagtgcagaccctctgagtgaggatgactttgagaccttctatgagatctgg
gagaagtttgaccctgatgccacccagttcatcgagtactgtaagctggcagactttgca
gatgccttggagcatcctctccgagtgcccaagcccaacaccattgagctcattgccatg
gatctgcccatggtcagtggggatcgcatccactgcttggacatcctttttgccttcacc
aagcgggtcctgggagacagcggggagttggacatccttcggcagcagatggaggagcgg
ttcgtggcatccaatccttccaaagtgtcttacgagccaatcacgaccacactgcggcgc
aaacaggaagaggtgtctgcagtggtcctgcagcgcgcctaccggggacatttagcaagg
cggggcttcatttgcaaaaagacaacttccaataagctggagaatggaggcacacaccgg
gagaaaaaggagagcaccccgtctacagcctccctcccatcctatgacagtgtaactaaa
cctgagaaggaaaaacagcaacgggcagaggaaggaagaagggaaagagccaaaagacaa
aaagaggtcagagaatccaagtgttaa
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integrated database retrieval system
