KEGG   Pteropus vampyrus (large flying fox): 105307810
Entry
105307810         CDS       T07815                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pvp  Pteropus vampyrus (large flying fox)
Pathway
pvp03030  DNA replication
pvp03410  Base excision repair
pvp03420  Nucleotide excision repair
pvp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105307810 (RFC4)
   03410 Base excision repair
    105307810 (RFC4)
   03420 Nucleotide excision repair
    105307810 (RFC4)
   03430 Mismatch repair
    105307810 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvp03032]
    105307810 (RFC4)
   03036 Chromosome and associated proteins [BR:pvp03036]
    105307810 (RFC4)
   03400 DNA repair and recombination proteins [BR:pvp03400]
    105307810 (RFC4)
DNA replication proteins [BR:pvp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105307810 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    105307810 (RFC4)
Chromosome and associated proteins [BR:pvp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105307810 (RFC4)
DNA repair and recombination proteins [BR:pvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105307810 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    105307810 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_30 AAA_16 AAA_11 AAA_24 AAA_28 SLFN-g3_helicase Mg_chelatase AAA_5 AAA_19 DUF815 Viral_helicase1 AAA_7
Other DBs
NCBI-GeneID: 105307810
NCBI-ProteinID: XP_023381366
UniProt: A0A6P6C1T9
LinkDB
Position
Unknown
AA seq 367 aa
MQAFLKGTSITTKPPLTKDRGVAAIAGSSGENKKAKPVPWVEKYESHSLYLKLYVTNVTV
IQPLIDLTDCKDLLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQ
VVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFC
LICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAGKEHVKISNEGVSYLVKVSEGD
LRKAITFLQSATRLTGGKEITEKVITDIAGVIPAETIDGIFAACQSGSFDKLEAVVKDLI
DEGHAATQLVNQLHDVIVENDNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVM
QQLTQNC
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaggcgtttctaaaaggtacatctatcactactaaaccaccattgaccaaggatcga
ggagtagctgccattgcaggaagcagtggagagaacaagaaggccaaacctgttccatgg
gtggaaaaatatgagtctcatagtttatatcttaagctatatgttaccaatgtaacagta
atacaacccttgattgacctcacagattgcaaggaccttctccctaatctcttgttttac
gggccacctggaactggaaaaacatccactattttggcagcagctagggaactttttggg
cctgaactttttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaa
gtagttagagagaaggtgaagaattttgctcaattaactgtatcaggaagtcgttcagat
gggaagccatgtcctccttttaagattgtgattctggatgaagcagattctatgacctca
gctgctcaggcagctttaagacgtaccatggagaaagagtctaaaaccacccgattctgt
cttatctgtaactatgtcagtcgaataattgaacctctgacctctagatgttctaaattc
cgcttcaaacctctgtcagataaaattcagcagcagcgattattagacattgccggtaaa
gaacatgtcaaaattagcaacgagggagtatcttatcttgttaaagtgtcagaaggagac
ttaagaaaagccattacatttcttcaaagtgctactcgattaacaggtgggaaggagatc
acagagaaggtgatcacagatattgctggggtaataccagctgagacaattgatggaata
tttgctgcatgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaata
gatgagggtcatgcagcaactcagcttgtaaatcaacttcatgatgtgattgtagaaaat
gacaatctttctgataaacagaagtccatcattacagaaaaacttgccgaagtagataag
tgcttagcagatggtgctgacgaacacctgcaattgatcagcctctgtgctactgtgatg
cagcagttgactcagaattgttga

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