Pteropus vampyrus (large flying fox): 105308781
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Entry
105308781 CDS
T07815
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X3
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pvp
Pteropus vampyrus (large flying fox)
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvp03009
]
105308781 (IGHMBP2)
03012 Translation factors [BR:
pvp03012
]
105308781 (IGHMBP2)
Enzymes [BR:
pvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105308781 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
105308781 (IGHMBP2)
Ribosome biogenesis [BR:
pvp03009
]
Eukaryotic type
Other ribosome biogenesis factors
105308781 (IGHMBP2)
Translation factors [BR:
pvp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105308781 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
nSTAND3
Viral_helicase1
AAA_16
DEAD
ResIII
Helicase_RecD
AAA_22
UvrD-helicase
IstB_IS21
SLFN-g3_helicase
PhoH
Zot
AAA_25
Herpes_ori_bp
AAA
NPHP3_N
ABC_tran
AAA_6
UvrD_C_2
ATPase
Flavi_DEAD
NTPase_1
T2SSE
DAP3
DnaB_C
AAA_31
AAA_7
Motif
Other DBs
NCBI-GeneID:
105308781
NCBI-ProteinID:
XP_011383089
UniProt:
A0A6P3RKN8
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MSSAAVESFVTKQLDLLELERDAEVEERRSWQETVSLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCVSAGALPSNSFASGDIVGLYDEGGQLATGVLTRVTQKSVTVAFDESHD
FQLSLDQEKSYRLLKLANDVTYKRLKRALITLKKYHSGPASSLIEVLFGGRAPSPASEIP
LPVLINASLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIIVQAVKQGCKVLCCAP
SNTAVDNLLERLARCGLRVLRLGHPARLLGSVQQHCLDEVLARGDSAPIIADIRRDIYQA
LVKNKKTQDKRERSDFRNEVKLLRKELREREEAAMLQSLTAADAVLATNTGASDDGPLKL
LPDSYFDMVVIDECSQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLM
ERLAEAHGAGAVRTLTVQYRMHQAIMQWASEALYHGQLTAHPSVAGHLLRDLPGVAATEE
TGIPLLLVDTAGCGLLEQEGDGDQSKGNPGEVRLVGLHIQALVDAGVRASDIAVISPYNL
QVDLLRQSLSHKHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVALVCDSRTVSNHAFLQTLVAYFTEHAEVRSAFEYLDGIVPENYSHGGSQGPGSSA
PARKPGGGPQEGAGAARAAARLARRTAHGKPLGSEARLRPSLGGGSADGAQDRDGADHLR
AVIAEFVASEQTQLEFPASLNSHDRMRVHQLAEEHGLRHSSAGEGRARYITVSKRTPPGT
PPPTGAAGQARPQPEPPSPAQTEHPVSGQSGRGQLDPRALRSLERPQPLERPPRARGGQE
RPAQGSGLRKLPGKKKKKEAKETLSPLGPVASDLPPEEDFDALVSAVIKADNTCGLAKCA
ASVVTLGQLCQHCGRRYCLSHHLPEVHGCGERARAHARQRISREGVLYAGSGAKDRSLDP
AKRAQLQRRLDKKLDELTSQRKSRRQGKEQ
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcggctgtggagagcttcgtgaccaagcagttggatctgctggagctcgag
agggacgcggaggtcgaggagcgcaggtcctggcaggaaactgtctctctgaaagagctc
cagagccggggcgtctgtttgctgaagctgcaggtgtccagccagcggaccgggctgtac
ggacggctcctggtcacctttgagccccggagatgcgtgtctgcaggagcgcttcccagt
aacagctttgcttccggcgacatagtgggtctgtatgacgaaggcggtcagctggccact
ggggtcctgactcgggtcacccagaagtcggtcacggtggcctttgatgagtcccatgat
ttccagctgagcttggaccaagagaaatcctaccgactgttgaaacttgccaatgacgtc
acttacaagcgcctgaaaagggcgctgatcaccctgaagaagtaccactctggccccgcg
tcctcactcatcgaggtcctcttcggtggccgcgcccccagtccggccagcgagataccg
ctgcccgtcctcattaacgcctccctggacgcctcccagaaggaagcggtttcgttcgcg
ctgtcccagaaggagctcgccatcatccacgggccgcccggcaccgggaagaccaccacc
gtggtggagatcatcgtccaggccgtgaaacagggctgcaaggtgctgtgctgcgcgccg
tccaacactgccgtggacaacctgctggagcgcctggcccgctgcgggctgcgggtgctg
cgcctcggccaccccgcccgcctcctgggctctgtccagcagcactgcctcgacgaggtc
ctcgcacggggcgacagcgccccgatcatcgcggacatcaggagggacatctatcaggcc
ctcgtgaaaaacaaaaagacccaggataagagagagagaagtgactttcgaaacgaagtc
aagctgttgaggaaagagctgagggagagggaggaggcagccatgctgcagagcctcacg
gcggccgacgcggtcctggcaacaaacacgggcgcctccgacgacggccccctgaagctg
ctgcctgacagctacttcgacatggtggtcatcgacgagtgttcccaggccctggaagcc
agctgctggatccccctgctgaaggccagaaagtgcatcctggctggggaccacaagcag
ctgccccccaccacggtctctcacaaggctgcgctggcgggactgtcgctcagcctgatg
gagcgcctggccgaggcgcacggcgcgggcgcggtgcggacgctgacggtgcagtatcgc
atgcaccaggccatcatgcagtgggcctcggaggccctgtaccacgggcagctcacggcg
cacccctccgtggcagggcacctcctgcgggacctcccgggagtggccgccacggaggag
acgggcatccccctgctgctcgtggacacggccggctgcgggctgttggaacaggagggg
gacggtgaccagtccaaagggaaccctggtgaagtgcgcctcgtcggtctgcacattcag
gccctggtggatgccggtgtccgggcaagtgacattgctgtcatctcgccgtacaacctc
caggtggacctgctgagacagagcctctctcacaagcaccccgagctggaaatcaagtcg
gtcgatggcttccagggacgtgagaaggaggccgtggtgctgtccttcgtcagatccaac
aggaaaggcgaagtcggcttccttgccgaggaccggaggatcaacgtggccgtcacgcgc
gctcggcgtcacgtggctctggtctgcgattctcgcaccgtcagcaaccacgccttcctg
cagaccctggtggcctacttcacagagcacgcggaagtgcgctcggccttcgagtacctt
gacggcatcgtccccgagaactattcccatgggggttcccagggtccgggctcttccgcg
cctgccaggaagcccggaggcgggccgcaggagggagccggggcggccagagccgctgcc
aggctggcccggaggacggcgcacgggaagcccttgggctctgaggcccgtttgcggccc
agccttggtgggggcagcgcagacggggcacaggacagagacggcgcagaccacctccgg
gcggtgatagcagagttcgtggcgagtgagcagacgcagctggagtttcctgcctccctg
aactcgcacgacaggatgcgcgtccaccagctcgccgaggagcacgggctgagacacagc
agtgccggggagggcagggcaaggtacatcacggtgagcaagaggaccccgcctggcacg
ccgcctcccacaggcgccgcgggccaagcccgcccccagcccgagccccccagccccgcg
cagacggagcaccccgtcagcgggcaaagcggccggggccagctggacccgagggcgctg
cgctctctggagaggccgcagcccctggagaggccgccgcgggcacggggcgggcaggag
cggccagcccagggctcggggctgcggaagctgccgggaaagaagaagaagaaagaagcg
aaagagacactttctcccctaggacctgtggcctcagacctgccccctgaggaggacttc
gacgccctggtctcggcagttatcaaggccgataacacctgtggtcttgcaaagtgcgcg
gccagcgtggtgactctgggccagctctgccagcactgcggccgccggtactgcctcagc
caccacttgcccgaggtccatggctgtggggagagggctcgtgcccacgcccggcagaga
atcagccgggaaggggtcctgtacgccggcagcggggccaaggacaggtccctggaccca
gccaagagggcccagctccagagacggctggataagaagctggacgagctgaccagccag
aggaagagcagaaggcaggggaaggagcagtga
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