Pteropus vampyrus (large flying fox): 105310009
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Entry
105310009 CDS
T07815
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp04613
Neutrophil extracellular trap formation
pvp05014
Amyotrophic lateral sclerosis
pvp05034
Alcoholism
pvp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
105310009 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
105310009 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105310009 (HDAC6)
09165 Substance dependence
05034 Alcoholism
105310009 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvp01009
]
105310009 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvp03019
]
105310009 (HDAC6)
04131 Membrane trafficking [BR:
pvp04131
]
105310009 (HDAC6)
03036 Chromosome and associated proteins [BR:
pvp03036
]
105310009 (HDAC6)
Enzymes [BR:
pvp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105310009 (HDAC6)
Protein phosphatases and associated proteins [BR:
pvp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105310009 (HDAC6)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105310009 (HDAC6)
Membrane trafficking [BR:
pvp04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105310009 (HDAC6)
Chromosome and associated proteins [BR:
pvp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105310009 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
105310009
NCBI-ProteinID:
XP_011384531
UniProt:
A0A6P3RXD3
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MTSTGQDSTTTKPRSRHNPHSTPHDSNVTSKRGTKKGATLHSSPKLAEVKKKGRMKKLSQ
ATGQDLIVGLQGLDLNVEAKTLSGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQ
EGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSY
TCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQK
HGIQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLQVLLPVALEFHPQLVLVAAGFDALQGDPKGEMAATPA
GFAQLTHLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLESPGAPCPSAQ
SSLSCALEALEPFWEVLVRSGETLEEDNVERDNAEEEEEEEEEPWQPPELPILTWPVLQA
RTGLVYDQQMMGHYNLWDNHHPEMPQRISQIMCRLEELGLSRRCLILPARPATDAELLTC
HSAEYVGRLRATEKMKPRELHREGANFDSIYICPSTFACAKLAAGSTCCLVEAVLAGEVL
NGVAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQVISGHALRILIVDWDVHHGNGTQHI
FEEDPSILYISLHRYDHGTFFPMGDEGASNQVGWAAGMGFTVNVAWNGPRMGDAEYLAAW
HRVVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILE
GGYNLTSISESMAACTRTLLGDPPPLLTLPRPPLSGALASIAKTIQIHRKYWRSLRVTKF
EDKEGPSSSKLIKEAPQPANPESAEKLTTLEGNILDASTEKDTSASSVQESTPAQTKSQT
DVVEHTQDQPSEAAKGEPMLDKTTSEAATPDQTTSEAAMLGQTTSEEAVEIAKLIQTPPA
SPVQGATAQISLSKLTGNLRTLELDNKAQEAPESQIPEEERLLGEAAGGQDVDNSVPMQA
FGNTDQVMFYAVTPLPWCPHLVAVCPIPEAGLDVTQPCQDCGALQENWVCLSCYEVYCGR
YISAHMLQHYKVSGHPMVLSYVDLSTWCYQCQAYVHHQALLDVKNVAHQNKFGEDMPHSH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgacctccactggccaggattccaccacaaccaagccgcggagtaggcacaacccccac
tcgaccccccacgactccaacgtcacctcgaagcgaggtactaagaagggtgccacgctc
cactccagccccaaactagcagaagttaagaagaaaggcagaatgaagaagctcagccag
gcaacagggcaagacctaatcgtggggctgcaagggctggatctgaacgttgaggccaag
acactgtctggtactggcttggtgttagatgagcagctcaatgaattccactgcctctgg
gatgacagcttccctgaaggccccgagcggctccatgccatcaaggaacaactgatccag
gagggcctcctggaccgctgtgtgtcctttcaggcccggtttgctgaaaaggaggagctg
atgttggttcacagcctagaatacattgatctgatggaaacaacccaatacatgaatgag
ggagaactccgtatcctagcagacacctatgactcagtttatctgcatccgaactcatac
acctgcgcctgcctggcttcaggctccgtcctcaggctggtggatgcagtcctgggggca
gagatccggaatggcatggccatcatcaggcctcctggacaccacgcccaacacagtctc
atggacgggtattgcatgttcaaccatgtggccgtggctgcccgctacgctcaacagaag
catggcattcagagggtccttatcgtggattgggatgttcaccacggtcagggaacacag
ttcacctttgaccaagaccccagcgtgctctatttctccatccaccgctacgagcagggt
cgattctggccccacctgaaggcctctaactggtccaccacaggttttggccagggacag
ggatacaccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacattgct
gctttcctgcaagtcctactgccagtcgcccttgagttccacccccagctggtcctggtg
gctgctggatttgatgcccttcaaggggaccccaagggtgagatggctgccactccggca
gggtttgcccagctaacccatctgctcatgggtctggcaggaggcagactgatcctgtct
ctggagggtggctacaacctccgctccctggctgagggcgtcagtgcctcacttcacacc
ctcctgggagacccttgccccatgctggagtcccctggtgccccctgcccaagtgcccag
tcttcactgtcctgcgctctggaagccctggagcccttctgggaagtccttgtgagatca
ggtgagaccctggaggaggacaacgtggagagggacaatgcagaagaggaggaagaggag
gaggaggaaccatggcagccccctgagctcccaatcctgacgtggccagtgctgcaggct
cgcacagggctggtctacgaccaacagatgatgggtcactacaacttgtgggataaccac
caccccgagatgccccagcgcatctcacagatcatgtgccgtctggaggagctgggcctt
tctaggcgctgcctcatcctgcctgcacgtcctgccacagacgctgagctgctcacctgc
cacagtgctgagtatgtgggtcgtctgcgggccacagagaagatgaaaccccgggagctg
caccgcgagggtgccaactttgactccatctacatatgccccagcaccttcgcctgtgcg
aagctggctgccggctccacatgctgccttgtggaggctgtgctggcaggagaggttttg
aatggtgttgctgtggtgcgtcctccgggacaccatgcagaacaggatgctgcttgtggt
ttttgctttttcaactctgtagctgtggctgctcgccatgcccaggtcatcagtgggcat
gctctgcggattttgatcgtggattgggacgtccatcacggtaatggaactcagcatata
tttgaggaggatcccagcatactctacatttccctgcaccgctatgatcatggcaccttc
tttcccatgggggatgagggtgccagcaaccaggtgggctgggccgcgggcatgggcttc
actgtcaatgtggcctggaatgggccccgcatgggtgacgctgagtacctggctgcttgg
catcgtgtggtgcttcccattgcctacgagtttaacccagaactggtgctagtctcagct
ggctttgatgcagcacggggggacccgttggggggctgccaggtatcacctgagggctat
gcccatctcacccacctgctgatgggccttgccagtggccgcattatcctaatcctagag
ggtggctataacctgacatccatctcagagtccatggctgcctgcacccgtaccctcctt
ggggacccgccacccctgctgaccctgccacggcccccactatccggggccctggcctcg
attgctaagaccatccaaatccatcgcaaatactggcgcagcttacgggtcacaaaattc
gaagacaaggagggaccctccagttctaagttgatcaaggaggcaccccaaccagcaaat
cctgagtcagctgagaagctgaccacactagaagggaacattctggatgcaagcacagaa
aaggacacctcagcatcatctgttcaagagtctactccagcccagactaagtcacagacg
gatgtggtagagcacactcaggaccagccctcagaggcagccaagggggaacccatgctg
gacaagaccacctcagaggcagccacgccagaccagaccacctcagaggcagccatgctg
ggccagaccacctcagaggaggctgtggaaattgccaagctgatccaaacccctccagcc
tcacctgtgcaaggagccacagcccagatatccctaagtaagctgactgggaatctcagg
accttggaactagacaacaaggctcaggaggccccagagtctcagatcccagaagaggag
aggctacttggagaagcagctggaggtcaggacgtggataattcagtgccgatgcaggcc
tttgggaacactgaccaggtcatgttttatgctgtgacaccactgccttggtgtccccat
ttggtggcagtatgccccattcctgaagcaggcctggacgtgacccagccttgccaggac
tgtggagcactccaggagaactgggtgtgtctgtcttgctatgaggtctactgtggtcgt
tacatcagtgcccatatgctacagcactacaaagtctcaggacacccaatggtcctcagc
tacgtcgacctttctacctggtgttaccaatgtcaggcctatgtccaccatcaggctctc
ctagatgtgaagaacgtcgcccaccaaaacaagtttggggaggacatgccccattcacac
taa
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