Pteropus vampyrus (large flying fox): 111728742
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Entry
111728742 CDS
T07815
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03015
mRNA surveillance pathway
pvp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111728742 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111728742 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvp03021
]
111728742 (SYMPK)
03019 Messenger RNA biogenesis [BR:
pvp03019
]
111728742 (SYMPK)
Transcription machinery [BR:
pvp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111728742 (SYMPK)
Messenger RNA biogenesis [BR:
pvp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111728742 (SYMPK)
U7-dependent histone pre-mRNA processing factors
111728742 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Symplekin_C
PDS5
Adaptin_N
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
111728742
NCBI-ProteinID:
XP_023391003
UniProt:
A0A6P6CUM9
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MHVRRVRSVTAASGRWRRRCLRRGAAEGARGGRRPEPREYWTAAMAGSSGDSITRRSVAS
QFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQELIINKDPTLLDNFLDE
IIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRDENVNVVKKAILTMTQL
YKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGVRTHAIKFVEGLIVTLSP
RLADSEVPRRQEHDISLDRIPRDHPYIQYSECRPSAGAVCLSSHQPPSTSFSRLLSSVHS
TKPLSLSSANLPPTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAE
IARNMPSSKDARKRPRDDSDPTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSD
TDITAEFLQPLLTPDNVANLVLISMVYLPEVMPASFQAIYTPVESAGTEAQIKHLARLMA
TQMTAAGLGPGECHMELTWTEGWHCAWWVLLTGREPVGHKDAFLTNTKSALGFFEPGWAE
LRSTIVGCPGLPVPTLRHSLSCQVRVKILASLVTQFDSGLKAEVLSFILEDVRARLDLAF
AWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALE
VIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMY
EKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQ
NHKLIHELAAVYTEAIADIKRTVLRVIEQPVRPLSPNSSSSPGISTLTYKAVARPARPGQ
PVPGRVCAVDRTHSFRARLHGCSTAHCRGSRQTTLVSPDDGGAQPGKESGARPKREGNSA
LSPLNPGELLIALHNIDSVKCDMKSIIKGEAVPPSPHFSSLASAAGKKLRHPHAPAGTCR
VRDHATLAPVRAATPSLGSFPVSFPLSICPSSLHLRNCERATLFFSPLFPSWPRVPAAWD
LEERGRGCRALCGPEQSVGRNWSPRGAPILARSSQFLGWPLCGLSRPLPPCPVQVWKYPK
VWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAHIPNS
IMTILEASGKQEPEAKEAPAGPLEEVRAHSPCLPHPSHLCLSEEAPAERGGGRGDSRPLL
PVPILLCPSS
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcggcgcgtgcgcagcgtcacggcggcgagcggaagatggcggcggcggtgt
ttgcgaagaggcgctgctgagggggcgcgagggggacggaggccggagccgcgggagtac
tggacagcagccatggcaggcagcagtggggacagcatcactcgccggagcgtggcatcg
cagtttttcacacaagaggaggggccgggcatcgacggcatgaccacctcagagagagtg
gtggatctcctgaaccaggcagcgctgatcaccaatgattcaaagatcacagtgctcaaa
caggtccaggaactgatcatcaacaaagatcccacactactagacaacttcctggatgag
atcatcgctttccaagtagacaaatcgattgaagtacgcaaatttgtcatcggcttcatc
gaggaggcatgcaagcgagacattgagttactgctgaaactgatcgcgaacctcaacatg
ctcttgagggacgagaacgtgaacgtggtgaagaaggccatccttaccatgacccagctc
tacaaggtggccctgcagtggatggtgaagtcacgggtcatcagtgagctccaggaggcc
tgttgggacatggtgtctgccatggctggggacatcattctgctgttggactctgacaac
gatggtgtccgcacccacgccatcaagtttgtggaaggcctcattgtcaccttgtcaccc
cgcctggctgactcagaggtgccccgccgccaagagcacgacatcagcctggaccgaatc
cctcgcgaccacccctacatccagtacagtgagtgccgcccgtcagctggtgccgtctgt
ctgtcatcgcaccagcccccgtccacttccttctcccgcctcctgagctctgtccacagc
acgaagcccctgtctctttcctcagccaacctgcccccgacactggccaaatctcaggtg
agcagcgtacgcaagaacctcaagttgcacctgttgagtgtgctgaagcacccggcctcc
ttggagttccaggcccagatcaccacgctgctcgtggacctgggcacacctcaggccgag
atcgcccgcaatatgcccagcagcaaggatgcccgcaagcggccccgcgacgactcagat
cccacactcaagaagatgaagctcgagcccaacctgggggaagacgacgaagacaaagac
ttggagccaggcccgtcggggacctcgaaggcctcagcccagatctcaggccagtcagac
acggacatcacagccgagttcctccagcctctactgacacctgacaacgtggccaatctg
gttctcatcagcatggtctacctgcccgaggtcatgcctgcctccttccaagccatctac
accccagtggagtcagcgggcaccgaagcccagatcaagcacctggctcggctcatggcc
acacagatgacggccgcaggactggggccaggtgagtgtcacatggagctgacgtggacc
gagggttggcactgcgcctggtgggttctccttactggaagagagcctgttgggcataag
gatgctttcctcactaacaccaagtctgcactggggttctttgagcctggctgggcggag
ttgcgaagcacgatcgtggggtgcccgggattgcctgtccccacgctgagacactcgctc
tcctgtcaggtgcgggtaaagatcctggccagcctggtgacgcagttcgactccggcctg
aaggccgaggtcctgtccttcatcctggaggacgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaatgcctacctggcagccggcgcctcgggcaccctggac
aagtacgaagactgcctcatccgtctgctctccggcctgcaggaaaagccagaccagaag
gatggaatcttcaccaaggtggtgctggaggcgccgctgatcaccgagagtgccctggag
gtgatccgcaagtactgcgaggacgagagccgcacctacctgggcatgtccacccttcga
gacctgatcttcaagcgcccatcccgccagttccagtacctgcacgtgctgctagacctc
agctcccacgagaaggacaaggtgcgctcccaggccctgctgttcatcaagcgtatgtac
gagaaggagcagctgcgggaatatgtggagaagttcgccctcaactacctgcagcttttg
gtccaccccaacccgccgtcagtgctgtttggagctgacaaggacacagaggtggcagcg
ccctggaccgaggagacggtaaagcagtgcctgtacctctacctggccctcctgccgcag
aaccacaagctgatccatgagctggcagccgtgtacactgaggccatcgctgacatcaag
cggacggtgctgagggtcatcgaacagccggtgaggcccctgagccccaactccagctct
tcccccggaatctccaccttgacctacaaggccgttgcccggccagcccggcctggccag
ccagtgcccgggcgtgtctgtgctgtggaccgcacgcactccttccgggcccgccttcac
ggctgcagcacagcccactgcaggggaagccgccaaaccacactcgtgtcccccgacgat
ggtggggcccagccgggaaaggagagcggagcgaggcccaaacgtgaagggaactcagcc
ttgtcccccctgaaccctggagagcttctgattgcattgcacaacatcgactcggtgaag
tgtgacatgaagtccatcatcaaaggtgaggcggtccccccctccccccacttcagcagc
ctggcctcggcggcgggaaagaagctcaggcacccacacgcccctgctggaacctgccga
gtcagagatcatgccaccttagcccctgtcagagctgcgacaccctcccttggctctttc
cctgtctccttccccctttccatctgtccttcctccctccacctaaggaactgtgaaagg
gccactctgtttttttctccccttttcccaagttggcctcgggtcccagctgcttgggac
ctggaagagagaggaagggggtgcagggctctgtgtggcccagagcaatctgttggtagg
aattggagccccagaggagcccccatcttggcaaggtcctcccagtttctggggtggcca
ctgtgtggcctctcacgcccactccctccctgccccgtccaggtgtggaagtaccccaag
gtgtgggagggcttcatcaagtgctgtcagcgcaccaagccccagagcttccaggtcatc
ctgcagctgccaccccagcagctgggtgccgtctttgacaagtgcccagagctccgggag
cccctgctggcccacgtccgctccttcaccccccaccagcaagcacacatccccaattcc
atcatgaccatcctggaggccagcggcaagcaggagccagaggccaaggaagcacctgca
gggcctctggaagaggtgagggcccacagcccctgtctcccccaccccagccacctctgt
ctctctgaggaggctcctgctgaaaggggtgggggtagaggggacagtcgccccttactc
cctgtgcccatcctgctgtgtccttcctcctag
DBGET
integrated database retrieval system
