Pseudomonas vesperimontis: WOB24_01105
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Entry
WOB24_01105 CDS
T11796
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pvq Pseudomonas vesperimontis
Pathway
pvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WOB24_01105 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvq03021
]
WOB24_01105 (rho)
03019 Messenger RNA biogenesis [BR:
pvq03019
]
WOB24_01105 (rho)
Transcription machinery [BR:
pvq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WOB24_01105 (rho)
Messenger RNA biogenesis [BR:
pvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WOB24_01105 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WZB53140
LinkDB
All DBs
Position
235650..236909
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQQGLENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
YDRPENAKNKILFENLTPLFPTKRLIMEAGNGSTEDITGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANIARNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NRAGTRREELLTAEDELQRMWILRKLLHPMDEIAAIEFLIDKLKATKTNEEFFQLMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagccgattaccgaactgctggaactcgctgaacaa
cagggcctggaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgttgaaa
aaacacgccaaaagcggtgaggaaatctccggtgatggcgtgctggagattctccaggac
ggtttcggctttctccgctctgcggatgcctcgtaccttgctggccccgatgacatctac
gtctcgccgagccagatccgccgctttaacctgcgtacgggcgacaccatcgttggcaag
atccgcccgccgaaagaaggcgagcgttatttcgcgctgctcaaagttgacaccatcaac
tatgaccgcccagaaaacgccaagaacaaaattctcttcgaaaacctgacgccgctgttc
cccaccaagcgtctgattatggaagccggtaacggctccaccgaagacattaccggccga
gtgattgacctctgtgcgccgatcggtaaaggccagcgcggcctgatcgttgcaccgccg
aaagccggtaagaccatcatgctgcagaacatcgcggccaacatcgcgcgcaacaacccc
gagtgccatttgattgttctgctgatcgatgagcgcccggaagaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtggcgtcgaccttcgacgagccgccaactcgccacgtg
caagtggctgaaatggttattgagaaggccaagcgcctggttgagcacaagaaagatgtg
gtcatcctgctcgactccatcacgcgtctggcgcgtgcttacaacaccgtgatcccaagc
tccggcaaggtgctcaccggtggcgttgacgcccacgcgttggagaagccgaaacgcttc
ttcggtgccgcacgaaacatcgaagaaggcggttcgctgaccatcatcgccaccgcgctg
gtggaaactggctcgaagatggatgaagtgatctacgaagagttcaaaggcacgggcaac
atggaactgccgctggaccgtcgtatcgctgaaaagcgtgtgttcccggcgatcaacatc
aaccgcgccggtacccgtcgcgaagaactgctgaccgcagaagacgaactgcagcgcatg
tggattttgcgcaagttgctgcacccgatggatgaaattgccgccatcgaattcctgatc
gacaagttgaaagcgactaagacgaacgaagagttcttccagttgatgaagcgtaagtaa
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