Pseudomonas vesperimontis: WOB24_07110
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Entry
WOB24_07110 CDS
T11796
Symbol
rne
Name
(GenBank) ribonuclease E
Organism
pvq Pseudomonas vesperimontis
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TcdA_TcdB
DUF8501
Motif
Other DBs
NCBI-ProteinID:
WZB54232
LinkDB
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Position
complement(1488860..1491931)
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AA seq
1023 aa
AA seq
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MKRMLINATQPEELRVALVDGQKLYDLDIESGAREQKKSNIYKGKITRVEPSLEAAFVDF
GSDRHGFLPLKEISREYFSKAPEGRVNIKDVLKEGQEVIVQVEKEERGNKGAALTTFISL
AGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLVAPSDMGLIVRTAGLGRSSEEMQW
DLDYLLQLWTAIKEASLDRAAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIEAQQEALS
FINQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVSID
INSSRATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKV
RESLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGQGIIRDVESLSLAI
LRLIEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRSRARIVIVPNDHLETPHF
EVQRIRDDSPEAQSTQSSYEMAVVEVEEEKPAAATRTLVRQEAAIKTAPQRTAPTPVEAV
ATQTVEAAKPSLFKGLVKSLVSLFASAEEEKPAVVEKKTSERPQRSDERRNGRQQNRSRG
GRNTEERKPREERAPREERQPRAPREERAPREERAPREERAPREERSPRETVEVREPQEV
RQSRPPREERQPRDRKPREDRQTRELREPLDAVPGDSATVSEEAVAERPQREPRQPRAPR
EERQPRAEQAAAAADEDVLNAEENLQDDEQEGSEDGDRPRRRSRGQRRRSNRRERQSDAN
GNPIEGSDEATEGTAADDIAITAAAVTSVVLTDTAEADQTGTEAAPVAAEQEQEQSREAV
AAEAPRVASETAAVEAVSSCADDASEVTAPVVDVHEAPAAPVAEEAPMPIAPLVEVPVAV
VVEPVVEVAKAAEAAPATVVSSNGRAPNDPREKRRLQREAERLAREAAEAPAAEVQVNAD
EPLAAEPQAELVAESVVEAAVEAPAEPEVETQVNTDVIAQPQSSLVTEADAEEQVKDAAK
PQI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgcaactcaacctgaagagctgcgtgtcgccctagtagat
gggcaaaaactttacgacctagacatcgagtctggtgcccgtgagcagaaaaaatccaac
atctacaaaggcaaaattacccgcgtagaacctagcctcgaagcagccttcgttgatttt
ggttccgatcgccacggctttctcccgcttaaagaaatctcccgcgaatacttcagcaag
gcccccgaaggccgcgtcaacatcaaagacgtgctcaaggaaggccaggaggtcattgtt
caggtcgagaaagaagagcgcggcaacaaaggcgcagccctgactacctttatcagcttg
gctggccgttatttggtgcttatgcccaataacccgcgcgccggcggtatctctcgccgt
atcgaaggcgaagagcgtaacgaactgcgtgaggccctcaacggcttagtcgcaccaagc
gatatgggcctgatcgtgcgcactgccggtcttggccgctccagcgaagaaatgcagtgg
gacctcgattatctgctgcaactctggacagctatcaaagaagcctcactggaccgtgcc
gcacctttcttgatctatcaagaaagcaacgtgatcattcgcgccatccgtgactacctg
cgccaggacatcggcgaagtactgatcgacagcatcgaagcgcagcaggaagccctgagc
tttatcaatcaagtgatgccgcagtacgccagcaagatcaagctgtatgaagacagcgtg
ccgctgttcaatcgctttcagatcgaaagccagattgaaaccgccttccagcgcgaagtg
aaactgccgtcgggcggctccatcgttatcgaccccaccgaagcactggtgtccattgac
atcaactcttcgcgcgccaccaaaggcagcgatatcgaagaaactgccctgcaaaccaac
ctggaagcggccgaagaaattgcccgccaactgcgtctgcgtgatatcggcgggttgatc
gtgatcgactttatcgacatgaccccggcgaagaatcagcgcgcagtagaagagaaagtc
cgcgaaagcctcgaagctgaccgcgcccgcgtacaggtcgggcgcatctcgcgctttggc
ttgctggaaatgtcccgtcagcgtctgcgtccgtcactgggcgaaagcagcggcatcgtc
tgcccgcgctgcaacggtcaaggcattatccgtgacgttgaatctttgtcgctggcgatt
ctgcgcctgatcgaagaagaagccctgaaagaccgcactgccgaagttcgcgcacaagtg
ccaatccccgttgcggccttcctgctcaacgaaaaacgtaactcgatcaccaagattgag
ctgcgtagccgcgcgcgcattgtcatcgtgccgaacgatcatctggaaacgccacacttt
gaagtgcagcgcatccgcgatgacagcccggaagcccagtccacccaatccagctatgaa
atggctgtggtcgaagtggaagaagaaaagccagcagccgcgacgcgcaccttggtccgc
caggaagccgctattaaaaccgcaccacagcgcaccgcccccactccagttgaagcagtg
gccacgcagacggttgaagcggctaagccgagcctgtttaagggcttggttaaatcgctg
gtcagcctgtttgccagcgccgaagaagaaaaacctgccgttgttgaaaagaaaaccagc
gaacgcccacaacgcagtgatgagcgccgtaacggtcgccagcaaaaccgcagccgaggc
ggccgcaacaccgaagaacgtaaaccacgcgaagagcgcgctccccgtgaagaacgccaa
ccacgtgctccgcgtgaagagcgcgcaccgcgagaggaacgcgcgccacgcgaagagcgt
gcacctcgtgaagaacgcagcccacgtgaaaccgtagaagttcgtgagccgcaggaagtt
cgtcaatcacgcccaccgcgtgaagagcgtcaaccacgtgaccgcaagccgcgtgaagat
cgccaaacacgtgaattgcgtgagccgttggatgccgtgccaggcgacagtgcaaccgtc
agcgaagaagccgtcgctgaacgtccgcaacgcgaaccgcgccaacctcgcgcaccgcgt
gaagagcgccagccgcgtgctgagcaggctgcagccgctgctgatgaagacgtgctgaac
gcggaagaaaacctgcaggatgatgaacaagaaggcagcgaagacggtgatcgccctcgt
cgccgctctcgtggtcagcgtcgtcgcagcaatcgccgcgagcgccagagcgatgccaac
ggcaacccgattgaaggcagcgatgaagcaacggaagggacagctgctgacgatatcgcc
atcactgcagccgccgttaccagcgttgttctcactgataccgccgaagctgatcaaacg
ggcaccgaagccgcaccggttgctgctgagcaagagcaagagcaatcgcgtgaagccgtt
gccgctgaagccccccgcgtagccagcgaaacggctgctgtagaagctgtaagcagctgc
gctgacgatgctagcgaagtaactgcacccgttgttgacgtgcatgaagcgcctgcagca
cccgttgctgaagaagcgccaatgcctatcgcgccgctggttgaagtgcctgttgcggtg
gtagtcgagccagtggtggaagtcgctaaagctgctgaagctgcaccggcgacagtggtc
agcagtaacggtcgtgcacctaacgatccacgtgaaaagcgtcgccttcagcgtgaagct
gagcgcttggcacgtgaagcagccgaagcacccgctgccgaggtgcaggttaacgctgat
gagcctttagctgcagagccgcaagcagaattggttgctgagtccgttgttgaagccgca
gtcgaagcacccgctgaacctgaggtcgaaacacaggtaaacactgacgtgatcgcgcag
ccacaaagctccctggttactgaagcagacgctgaagagcaggttaaagacgcggctaaa
ccgcaaatttaa
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