Pseudomonas veronii: PverR02_00435
Help
Entry
PverR02_00435 CDS
T04853
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03030
DNA replication
pvr03410
Base excision repair
pvr03420
Nucleotide excision repair
pvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PverR02_00435
03410 Base excision repair
PverR02_00435
03420 Nucleotide excision repair
PverR02_00435
03440 Homologous recombination
PverR02_00435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvr03032
]
PverR02_00435
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_00435
Enzymes [BR:
pvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PverR02_00435
DNA replication proteins [BR:
pvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PverR02_00435
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PverR02_00435
NER (nucleotide excision repair)
GGR (global genome repair) factors
PverR02_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AQY63577
LinkDB
All DBs
Position
87446..90220
Genome browser
AA seq
924 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYENLDIVPSLPIRGAKTLPARLQEHKDM
AFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFEEVQRDAKRTGLEV
AAPVAENAPVVSTELKYETILDQARFDVWLKKLGEAKLFAFDTETTGIDAQQAQLVGLSF
AVQPYEAAYIPLTHSYMGVPEQLDRDTVLRALKPILEDPSKLKVGQHAKFDMNILANCAI
GGDQNCGITVQGVAYDTMLESYVLDSTATRHDMDSLAQKYLGHTTVSFQDIAGKGAKQLT
FDQISLEQAGPYAAEDADVTLRLHQTLFEKLQAIPSLVSVLTDIEMPLVPVLARIERQGA
LVDAKLLGVQSVELGEKMVELEREAFAIAGEEFNLGSPKQLGAILYEKLGHPVLSKTAKG
QASTAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVA
ATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLL
HAFRNDLDVHKATAAEVFGVELGAVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQS
QAYIDRYFARYPGVLAYMERTRAQAAEQGYVETIFGRRLYLPDINAKNPALRKGAERTAI
NAPMQGTAADIIKKAMVAVDNWLTASGLDAKVILQVHDELVLEVREDLVDQVRDEIRQHM
SHAATLDVPLLVEVGVGDNWDEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcatatctgtaccgcgccttccac
gcgctgccaccgctgaccacttccaaaggcctgccgaccggtgcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaagcagtacccggacagcccgttcgcggtcgtgttcgac
gccaagggtgggacctttcgcgacgaaatgtacgccgaatacaaggccaaccgcccaagc
atgcccgacgacatgcgcctgcagatcgagcccctgcaccagagcgtgatcgccctgggt
ttcccgctgttgtgcgtcgaaggcgtcgaagccgatgacgtgatcggcaccctggcccgc
agcagcgcagccgcggaccgcccggtggtgatctcgaccggcgacaaagacatggcgcag
ctggtggacgggcacattaccctggtcaacaccatgaccggtagcgccatggatgtggag
ggcgtaaaggagaaatttggcgtcgctccggagcagattatcgactatctggcgttgatg
ggcgattcgtccgacaacatccctggcgttccgggcattggtccgaagaccgcttctggc
ttgctggtgggcgtcaatggcggcctgaaagagctgtatgaaaatctggatattgtgccg
agcctgcctatccgtggggccaagaccctgccggccaggctgcaagagcataaggacatg
gccttcctctcctatcaactggcgacgatcaagatcgacgtgccgctggacgtgggcctg
gatgatctgcacctgatcgagccggatcgcgaaaaactcctggagctgtacaccctcctg
gagttcaaaagctggttcgaggaagtgcagcgcgacgccaagcgcaccggcttggaggtg
gcggctccggtcgccgagaatgcgccggtcgtcagcaccgagctcaagtacgagaccatc
ctcgatcaggcgcgtttcgatgtgtggctgaagaagctcggcgaggccaagctgttcgcc
ttcgataccgagaccaccggcatcgatgcacagcaagcgcagctggttgggttgtcgttc
gcggtgcagccctacgaagcggcctacatcccgctgacccattcctacatgggcgtgccg
gagcagctggaccgcgacacggtgctgcgcgcgctcaagccgatcctcgaagacccgagc
aagctcaaggtgggccagcacgccaagttcgatatgaatatcctggccaactgtgccatc
ggtggcgatcagaattgtggcatcacggtgcagggcgttgcctacgacaccatgctcgaa
tcctatgtcctcgactccaccgccacacggcatgacatggacagcctggctcagaaatac
ctgggtcacaccacggtgagcttccaggatattgcgggtaaaggcgccaaacagctgacc
tttgaccagatctccctcgaacaggccggcccttacgcggctgaagatgccgacgtcacc
ctgcgcctgcaccagaccttgttcgaaaaactccaggcgatccccagcctggtcagcgtg
ctgaccgatatcgagatgccgctggtgccggtactggcgcgtatcgagcgccagggcgca
ctggtggatgccaagttgctcggcgtgcagagcgttgagctgggtgagaagatggtcgag
ctggagcgtgaggcatttgccatcgccggtgaggaattcaacctcggctcgcccaagcaa
ttgggcgcgatcctctacgaaaaactcggccacccggttctcagcaagaccgccaagggc
caggcgtcgaccgccgaagcggtgcttgccgaactggccgagcaggatttcccgctgccc
aaggtgctgatgcagtaccgctccatgagcaagctgaaaagcacctacaccgaccgcttg
cctgagcagatcaacccgcgcaccgggcgcatccatacctcgtatcaccaggcggtggcg
gccaccgggcgtttgtcgtcgagtgatccgaacctgcagaacattccgatccgcaccgct
gaaggccggcggattcgtcaggcgttcgtcgcgccaaaaggctacaagctgctggcggcg
gactactcgcagatcgagctgcggatcatggcgcacctggccaaggacgaaggcttgctg
cacgccttccgcaatgacctggacgtacacaaggccaccgccgccgaagtatttggcgtg
gagctgggcgcggtcaccaccgaccagcgtcgcagcgccaaggcgatcaacttcggcctg
atctacggcatgagcgcgtttggcctggccaagcagatcggtgtcgatcgtaaacagtcc
caggcctatatcgaccgttatttcgcccgctatccgggcgtgctggcctatatggagcgc
acccgcgcccaggcggccgagcagggttatgtcgagacgatcttcggtcgccgcctgtac
ctgccggacatcaacgcgaagaacccggcgctgcgcaaaggcgccgagcgcacggcgatc
aacgcgccgatgcagggcacggcggcggatatcatcaagaaagccatggtggcggtggat
aactggctgaccgcgtcaggcctggatgccaaagtcatcctgcaggtacacgatgaactg
gtgctggaggttcgcgaggatctggtcgatcaagtgcgtgacgagatccgccagcacatg
agccatgcggcgacgctggatgtgccgttgctggtagaagtgggcgtgggtgataactgg
gacgaagcgcactga
DBGET
integrated database retrieval system
