Pseudomonas veronii: PverR02_07760
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Entry
PverR02_07760 CDS
T04853
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pvr
Pseudomonas veronii
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvr03016
]
PverR02_07760
Enzymes [BR:
pvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PverR02_07760
Transfer RNA biogenesis [BR:
pvr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PverR02_07760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AQY64962
LinkDB
All DBs
Position
1707145..1708278
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AA seq
377 aa
AA seq
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MAIDIHWICDNDSLGQHCAEWQQLPFVALDTEFMRVDTFYPIAGLIQIGDGVRAYLIDPL
TIDNWQPLAALLENPAVIKVVHACSEDLEVLLRLTGSLPVPLFDTQLAAAYLNLGFSMGY
SRLVQAVLDIDLPKGETRSDWLQRPLSETQVSYAAEDAVHLAEVFIRLRPRLSDDKYAWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREQQARARDLPRNRII
REHSLWPLAKSQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRAGSVSMDQWPPAVAEPL
PVDAAALIKHLRALGQAQAERLEMAPELMLRKKTLEALVKSGYPDGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgatattcactggatctgcgacaacgatagcctcggccagcattgcgccgaa
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttttat
cccattgccgggctgatccagatcggtgatggcgttcgcgcttacctgatcgaccccctg
accatcgacaactggcaaccactggcggcgttgctggaaaacccggccgtgatcaaagtg
gtccacgcctgcagtgaagacctggaagtgttgctgcgcctgaccggcagcctgccggtg
ccgttgttcgacacccaactggccgcggcttacctgaacctcggcttctccatgggctat
tcgcgcctggtgcaagccgtgctcgatatcgacttgcccaagggcgaaacccgctcggac
tggctgcagcgcccgttgtccgagacccaggtgagctacgccgccgaagatgcggtccac
ttggccgaggtcttcattcgcctgcgcccgcggctgtcggacgacaaatacgcctgggtc
ctggaagacggtgccgaactggtggccaacctgcgccgcgaagtcgacccttacgaggtg
taccgcgaggccaagctggcgtggaaactgtcccgtgcccaactcgccgtgctgcgtgaa
ctgtgcgcctggcgcgagcagcaagcgcgtgcccgtgacctgccgcgcaatcgcatcatt
cgtgaacactcgctgtggcccctggccaaatcccagccggataacctcgccgccctgggc
aaaatcgaagacatgcacccgcgcaccgtgcgtcaggatggccagtttctgctggacctg
atcaagcgcgccggcagcgtgtccatggaccaatggccgcccgccgtggctgaaccgctg
ccggtggatgccgctgcgctgatcaagcacctgcgcgccttgggccaggcgcaagccgaa
cgcctggagatggcgccggaactgatgctgcgcaagaaaaccctcgaagccctggtcaaa
agtggctaccccgacgggccttaccaattgccagactcgctgcgtggctggcgccgcgag
ttgatgggccaggcgctgctcgacagcctggccactgccggagaacagccttga
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