Pseudomonas veronii: PverR02_08915
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Entry
PverR02_08915 CDS
T04853
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PverR02_08915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvr03019
]
PverR02_08915
03009 Ribosome biogenesis [BR:
pvr03009
]
PverR02_08915
Enzymes [BR:
pvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PverR02_08915
Messenger RNA biogenesis [BR:
pvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PverR02_08915
Ribosome biogenesis [BR:
pvr03009
]
Prokaryotic type
rRNA helicases
PverR02_08915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
AQY65181
UniProt:
A0A0R3BGT1
LinkDB
All DBs
Position
1936499..1938172
Genome browser
AA seq
557 aa
AA seq
DB search
MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGHDMIGQAQTGTGKTAAF
ALPILHCIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLSTVNHLVLDEADEMLKLGFMDDLEVIFKALPPT
RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL
AAALLRKATNAQALTLAAIEKERPLVPNNAPRGDRPERSGDRPERGDRERRAPVPLAEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLEKLLTKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggcttcgccgcttttaatcttaacccgaacattcttgctgcc
gtcattgcgactggctacgaagaaccttcggcgattcagcagcaatcgatcccgatcatc
atggccggccacgacatgattggccaggcgcaaaccggtaccggtaaaaccgccgcgttc
gccctgcctatcctgcactgcatcgatcctgccaagcgcgaaccgcaagccctgatcctg
gcgccaactcgtgagttggcgctgcaagtagcaaccgcttttgaaacctacgccaagcaa
atgccaggcgtaaccgttgtggccgtctacggcggcgcgccgatgggcccgcaactcaag
gctatccgtaatggcgcacagatcgttgtcgccactccgggtcgtctgtgcgaccacctg
cgtcgtgacgagaaagtcctgtcgaccgtgaaccacctggttctggacgaagctgacgaa
atgttgaagctgggcttcatggatgacctggaagtcatcttcaaggcactgccaccgacc
cgtcagaccgtgctgttctcggccaccctgccgcagtcgatccgtgccattgccgaacgc
cacctgcgcgatccgcaacacgtgaagatccagaccaagactcagaccgttaccgcgatc
gaacaggctcacctgttggttcacgctgaccagaagacctcggctgtattgagcctgctg
gaagtcgaagacttcgacgcgctgatcatgttcgtgcgtaccaagcaagcgaccctggac
ctggccagtgccctcgaagccaaaggctacaaagccgctgcgctgaacggtgacatcgcc
cagaaccaacgtgagcgcgtgatcgactccctcaaggatggccgtctggacatcgttgta
gcgaccgacgtagctgctcgtggcctcgacgttccacgtatcacccacgtgttcaacgtt
gacatgccttacgatccagagtcctacgttcaccgtatcggccgtaccggccgtgcgggt
cgcgaaggtcgcgcactgctgctggtgacgccgcgtgagcgccgcatgctgcaagtgatc
gagcgtgtcaccgggcagaaggttgctgaagtccgcctgccggatgcccaggccgttctc
gatgcgcgcatcaagaaactgaccaacagtctgtcgccactggtggctgacgctgaatcg
acccacggcgacctgctggaccgcctgaccgccgatatcggttgcaccccgcgtgccctg
gctgcagccctgctgcgcaaagccaccaacgctcaggccctgaccctggcagccatcgag
aaagaacgcccactggtaccgaacaacgcgccacgcggtgatcgtccagagcgttccggc
gaccgtcctgagcgtggtgatcgtgagcgtcgcgctccggtgccattggctgaaggtcgt
gctcgctgccgtaccgcgctgggcgcgcgtgacggtatcgcggccaagaacctgctgggc
gctatcctcaacgagggtggcctggcacgtgaggccatcggtcgcatccaggtccgtgac
agcttctccctggtggagctgccggaagacggtctggaaaaactgctgaccaagctgaaa
gacacacgcgttgccggtaagcagctcaagctgcgtcgctaccgcgaagattga
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