KEGG   Pseudomonas veronii: PverR02_13130
Entry
PverR02_13130     CDS       T04853                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvr  Pseudomonas veronii
Pathway
pvr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pvr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PverR02_13130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvr03021]
    PverR02_13130
Transcription machinery [BR:pvr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PverR02_13130
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28 GerE
Other DBs
NCBI-ProteinID: AQY65946
LinkDB
Position
complement(2842097..2842618)
AA seq 173 aa
MDSVSTSFTHLYGTHHSWLLGLLRRRLNDRWDAADLAHDTFIRILGRPLAETDHVGQRSY
LATIARGLCIDHWRRRQLERAWLQTLAERPEARQPSPEQRAIIVETLYEVDTMLARLPKK
VSEAFLLAHLHGLPYKQIAVQLGVCERMVKKYMAQALLHCAILEAELDGMLVQ
NT seq 522 nt   +upstreamnt  +downstreamnt
atggatagtgtgtcgacctccttcacccacctctatggcacccaccacagctggctgctc
ggcctgctgcggcggcgcctgaacgaccgctgggatgccgccgacctggcccacgacacg
tttatccgcatcctcggccgcccgttggccgaaaccgatcacgtcggccaacgctcctac
ctggccaccatcgcccgtggcttgtgcatcgaccactggcgccgccgccaactggaacgc
gcctggctgcaaaccctggccgagcgcccggaagcgcggcagccgtcgccggagcagcgg
gcgatcatcgtcgaaaccctctacgaagtggacacgatgctcgcgcgcctgccgaagaag
gtcagcgaggcctttttactcgcgcacttgcacggcctgccctacaagcagatcgccgta
cagctcggcgtgtgcgagcgcatggtcaagaagtacatggcccaggccctgctgcactgc
gcgattctggaagccgaactcgacgggatgctggtgcaatga

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