Pseudomonas veronii: PverR02_13130
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Entry
PverR02_13130 CDS
T04853
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvr
Pseudomonas veronii
Pathway
pvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PverR02_13130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvr03021
]
PverR02_13130
Transcription machinery [BR:
pvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PverR02_13130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
AQY65946
LinkDB
All DBs
Position
complement(2842097..2842618)
Genome browser
AA seq
173 aa
AA seq
DB search
MDSVSTSFTHLYGTHHSWLLGLLRRRLNDRWDAADLAHDTFIRILGRPLAETDHVGQRSY
LATIARGLCIDHWRRRQLERAWLQTLAERPEARQPSPEQRAIIVETLYEVDTMLARLPKK
VSEAFLLAHLHGLPYKQIAVQLGVCERMVKKYMAQALLHCAILEAELDGMLVQ
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgtgtcgacctccttcacccacctctatggcacccaccacagctggctgctc
ggcctgctgcggcggcgcctgaacgaccgctgggatgccgccgacctggcccacgacacg
tttatccgcatcctcggccgcccgttggccgaaaccgatcacgtcggccaacgctcctac
ctggccaccatcgcccgtggcttgtgcatcgaccactggcgccgccgccaactggaacgc
gcctggctgcaaaccctggccgagcgcccggaagcgcggcagccgtcgccggagcagcgg
gcgatcatcgtcgaaaccctctacgaagtggacacgatgctcgcgcgcctgccgaagaag
gtcagcgaggcctttttactcgcgcacttgcacggcctgccctacaagcagatcgccgta
cagctcggcgtgtgcgagcgcatggtcaagaagtacatggcccaggccctgctgcactgc
gcgattctggaagccgaactcgacgggatgctggtgcaatga
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