Pseudomonas veronii: PverR02_17830
Help
Entry
PverR02_17830 CDS
T04853
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pvr
Pseudomonas veronii
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvr03000
]
PverR02_17830
Transcription factors [BR:
pvr03000
]
Prokaryotic type
Helix-turn-helix
Other families
PverR02_17830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
HTH_8
PAS_4
HTH_30
AAA_2
HTH_23
HVO_A0261_N
AAA_5
HTH_28
AAA_16
HTH_50
Mg_chelatase
HTH_20
HTH_22
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AQY66833
LinkDB
All DBs
Position
3965114..3966982
Genome browser
AA seq
622 aa
AA seq
DB search
MLAANSKDHVDCVSRVVRNADRLPQAPVPSLIFDSWRRSMEQHHLDPGSLQGPRILSEPL
LKECRERAELFMHIASEEVGQLHHRVRHADYCVMLTDAQGQTIDHRVDTAIRTDCRKAGL
YLGTCWSEAEEGTCGVATVLTSKAAVTVHKRDHFRAAFIGLTCSAAPIFDPQGNLLGVMD
ASALKSPDDRRSQHLVRQMVAQSAQAIENAFFMHSARQHWVLQAHSTPGYVDSQPDLLLA
WDQDGRLHALNSKARQALRRRFGQVPAHIGEVFDLDALRAVTDQSAQQLHWLGEPGALHV
RVSAPRRKPARPAKAVNNQVDPRVEEHLRLALRVKDRNLPVLVQGETGAGKEVFAHQLHE
RSARRDGPFVAVNCAAIPENLIESELFGYVAGAFTGASNKGMPGLLLQADGGTLFLDEIG
DMPLALQTRLLRVLAEGEVAPLGAAKTRAVDIQVICASHRDLAVLVSEGRFREDLYFRLG
CARFCLPPLRERSDKLALINRLLEQEAHSGAISVGIGPAALEVLLGYAWPGNVRQLRHVL
AYACAVCDGGTIQLANLPVEVRGEQIEADVEERVSPERQVVLDALIRHRWKPSPTAQALG
ISRATLYRRVNQLGIDMPGKHI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcgaactccaaagaccatgtcgactgcgtcagtcgcgtggtccgcaatgcc
gatcgcctgccccaggctccggtgccgtcgctgattttcgattcatggcgccgttccatg
gagcaacaccacctcgaccctggctcgctgcaagggccacgcattctcagtgaaccgctg
ctcaaggaatgccgtgagcgcgccgaactgttcatgcacatcgccagcgaagaagtcggc
caactccaccaccgcgtgcgccatgccgactactgcgtgatgcttaccgacgcccagggc
cagaccatcgaccaccgcgtggacacggcgattcgcaccgattgccgcaaggccggcctg
tacctgggcacctgctggtcggaagccgaagaaggcacctgcggcgtggccacggtgctg
accagcaaggctgccgtgacggtgcataagcgcgatcactttcgcgcagcgtttatcggg
ctgacctgctccgccgcgccgatcttcgacccccagggcaacctgctgggggtgatggac
gcctcggcgctcaaatccccggatgaccggcgcagccagcatctggtaagacagatggtg
gcgcagagcgcacaagccatcgaaaatgccttcttcatgcacagcgcgcgtcagcactgg
gtgctccaggcccacagtacgcccggctatgtcgacagccagcccgacctgctgctggcc
tgggaccaggatgggcgcctgcatgcgttgaacagcaaggcgcgccaggccctgcgtcgg
cgctttggccaggtgccggcgcatatcggcgaggtcttcgacctggatgcgttgcgcgcg
gtcaccgatcaatcggcgcaacagctgcactggctgggcgagcccggcgcattgcatgtg
cgggtcagcgcgccgcggcgtaagccggcgcgtccagcgaaggccgtaaacaatcaggtc
gacccccgggtggaagaacacctgcgcctggccttgcgggtcaaggaccgcaacctgccg
gtgctggtgcagggtgaaaccggcgccggcaaggaagtcttcgcgcaccaactgcatgag
cgcagcgctcgtcgcgacgggcccttcgtggcggtgaactgcgcggcgatcccggaaaac
ctcatcgaaagcgagctgtttggctatgtcgccggggcctttaccggcgcgtcgaacaag
ggcatgcccgggctgttgttgcaggccgatggcggaacgctgttcctcgatgaaatcggc
gatatgccgctggccctgcagacgcgcttgctgcgggtattggccgaaggtgaagtggca
ccgctgggtgcggcaaaaacccgtgcggtggatatccaggtgatctgcgccagccaccgc
gacctggcggtgctggtcagcgaggggcgctttcgcgaagacctgtactttcgcctgggc
tgcgcacggttctgcctgccgcccttacgcgagcgcagcgacaagctggccttgatcaat
cggctgctggaacaggaggcgcacagcggcgcaatctccgtgggcatcggccccgccgcg
ctggaggtactgctcggctatgcctggccgggcaatgtgcggcaactgcgccatgtgctg
gcgtatgcctgtgcggtgtgcgacggcggcaccatccagttggctaacctgcccgtggag
gtgcgcggcgagcagatcgaggccgacgtggaagaacgtgtcagcccggaacgccaggtg
gtgctggatgcactgatccggcatcgctggaagccgtcgccgacggcccaggcgctgggg
atttcgcgggcgaccctgtatcgccgggtcaaccaactgggcatcgacatgccgggcaaa
catatctga
DBGET
integrated database retrieval system
