Pseudomonas veronii: PverR02_22755
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Entry
PverR02_22755 CDS
T04853
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PverR02_22755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvr03019
]
PverR02_22755
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_22755
Enzymes [BR:
pvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PverR02_22755
Messenger RNA biogenesis [BR:
pvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PverR02_22755
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PverR02_22755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AQY67742
UniProt:
A0A0R3BI62
LinkDB
All DBs
Position
complement(5024126..5026252)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVANGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQGLSAIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE
GYGGLRLNDSCRPLLKGEVSLELRRDLKPQTTAKSSTSQASQLVRFEEREQWEALRALRR
KLAQEHSVPPYVIFPDSTLLEMLREQPTTLAEMGRVSGVGARKLERYGQAFLEVLGGQAE
APKEIADIRHELISLARAGMTPIQIAGQLQCSEKNVYTLLAESIGKQQLSLEQALDLPED
LLGEIQDAFLDGEGELPPVAEIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagcaggctcaacgcgtcctcaaggacatcttcggctacgacagttttcgtggc
cgccagggtgcgatcattgagcgcgtggccaatggcggtgatgccctcgtcctgatgccg
accggcgggggcaagtcgttgtgtttccaggtgccggcgttgctacgtaacggccttgcc
gtggtggtgtcgccgttgatcgcgctgatggacgatcaggtggcgacccttgaggagctc
ggcgttgctgccgccgcattgaactccacgctcagcgccgaacagcagcgcgacctggcc
gcgcgtatcaagcgcggcgaagtgaaaatgctttacctggcccccgagcgcctggtgcag
ccgcgcatgctggccttcttgcagagcctggaaatcgccctgttcgccatcgatgaagcg
cactgcgtatcgcaatgggggcatgatttccgtcgcgaatatttgcagttggggcagttg
gcggaactgttccccgacgtcccgcgtatcgccctgaccgccaccgccgacaagcgcact
cgcgaagaaatcgtcgagcgcctgcatttgcagaacgccgagcgcttcctgtcgagcttt
gaccggccgaatattttctatcgcatcgtgcccaaggagcagccgcgcaagcagttgctg
gcgttcctgtccgagcggcgcagcgatgcgggcatcgtctattgcctgtcgcgcaagaag
gtcgacgaagtggccgccttcctgtgcgagcagggttatccggcgttgccctaccatgca
ggcttgcccaacgacttgcgtgcctatcatcagaagcgcttcctcaacgaggaaggcctg
atcatggtggcaaccatcgcgttcggcatgggcatcgacaagtccaacgtgcgcttcgtg
gcccatatggatctgcccaaatccctcgaggcgtattaccaggaaaccgggcgcgccggg
cgtgatggcctgccggccgatgcgtggatggtctacggcctgcaagacgtggtgatgctc
aagcaaatgctgcagaactccgaaggtgacgagcgccacaaacgcctggaacagcacaag
ctcgacgccatgctgtcactctgcgaagagacgcgttgccgccgccagaccttgctggcg
tatttcgacgaagacatgcccgaaccctgcggccattgcgacaactgtgtcgacggcgtg
caaacctgggatgccactgaaccggcgcgccagggtttgtccgccatctaccgcaccggc
cagcgttatggcgtcggccatctggtggatgtgttgctgggcaaggacaacgagaaggtg
cgcagcttcggccatgagaaactctcggtctacggcgtcggcaaggcccgtgccgaaggc
gaatggcgatcgctgttccgccagatggtcgcgcgcggcctggtggacatcgacatcgaa
ggctacggcggcctgcgcctgaacgacagttgccggccgttgctcaagggggaagtgagc
ctggaactgcgccgcgacctcaagccgcagaccactgccaagagcagtaccagccaggcc
agccaactggtgcgcttcgaggagcgtgaacagtgggaagccttgcgtgccctgcggcgc
aagctggcgcaggaacacagcgtgccgccttacgttattttccccgactcgaccttgctg
gagatgttgcgcgagcagccgaccaccctggccgaaatgggccgggtcagtggcgtgggc
gcgcgcaagctggaacgttatggccaggccttcctcgaagtgctcggcggccaggccgaa
gcgccgaaggaaattgccgatattcgccacgaattgatcagcctggcgcgggccggcatg
accccgatccagatcgctggccagttgcaatgctcggaaaaaaacgtctacacgctgctg
gccgaatccatcggtaagcaacagttgtcgttagagcaggcccttgatttgccagaagat
ttgctcggtgaaatccaggatgccttcctggacggtgaaggcgaactgccaccagttgcg
gagattgcaccgctgttcacggggcgggttcccgagggtgttttgtactgtgtgcgtgcc
gcgttgcagtctgagttcgaaatttag
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