Pseudomonas veronii: PverR02_23025
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Entry
PverR02_23025 CDS
T04853
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pvr
Pseudomonas veronii
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvr03009
]
PverR02_23025
Enzymes [BR:
pvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PverR02_23025
Ribosome biogenesis [BR:
pvr03009
]
Prokaryotic type
rRNA helicases
PverR02_23025
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
AQY67794
UniProt:
A0A0R3BAX1
LinkDB
All DBs
Position
complement(5084958..5086304)
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AA seq
448 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFADDVQRLVAECVNRQQTM
LFSATTGGSTLRDMVAKVLNNPEHLQVNNVSDLNATTRQQIITADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAAADRIYGRLVAQDYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDMVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYTGPKKVKASGKAVGVKKKKVDGKGDKKKAGAKSPTKRKIANR
PKTDNLSLVSKDGMAPLKRRKPEAPAAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggcagcggccatcccgctcgcgctcgaagggcgtgacctg
cgggtgacggctcaaaccgggagtggcaagacggccgctttcgtcctgcctattcttaac
cgcctgatcggcccggccaaagtccgcgtcagcatcaagaccctgatcctgctgccgacc
cgcgagctggcccagcagaccctgaaagaagtcgaacgtttctcgcagttcaccttcatc
aagtccggcctgatcaccggcggcgaagacttcaaggttcaggccgccatgctgcgcaag
gtcccggacatccttatcggcaccccgggccgcatgatcgagcaactcaacgctggcaac
ctcgacctcaaggaagtcgaagtgctggtgctcgacgaagccgaccgcatgctcgacatg
ggctttgccgatgacgtgcagcgcctggtggccgagtgcgtgaatcgtcagcagaccatg
ctgttctccgccaccaccggcggttcgaccctgcgcgacatggttgccaaggtcctgaac
aaccccgagcacctgcaggtcaacaatgtcagcgacctgaacgcgaccacgcgccagcag
atcatcaccgctgaccataacgtccacaaagaacagatcctcaactggctgttggccaac
gagacctatcagaaggccatcgtgttcaccaacacccgcgctgcggctgatcgcatctac
ggccgcttggtggcgcaggattacaaggcgttcgtcctgcacggcgagaaagaccagaag
gaccgcaagctggcaatcgaccgcctcaagcaaggcggggtgaagatcctggtcgccacc
gacgtcgccgcgcgcggcctggacgtcgacggcctggacatggtcatcaacttcgacatg
ccccgcagcggcgacgaatacgtccaccgtatcggtcgcaccgggcgtgctggcaacgat
ggcctggcgatctcactgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tatctcaagcagtcgttcgagcgccgcaccatcaaggaagtcaaaggcacctacaccggg
ccgaagaaggtcaaggcttcgggcaaggccgtaggcgtgaagaagaaaaaagtcgacggc
aagggtgacaagaagaaggccggtgccaagtcgccgaccaagcgcaagatcgccaaccgg
ccgaagaccgacaacctgtcgttggtcagcaaggacggcatggcgccgctcaagcgccgc
aagccagaagcaccggctgccgaataa
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