Pseudomonas veronii: PverR02_26550
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Entry
PverR02_26550 CDS
T04853
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PverR02_26550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_26550
Enzymes [BR:
pvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PverR02_26550
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PverR02_26550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
AAA_16
AAA_17
SLFN-g3_helicase
AAA_28
T2SSE
NACHT
NTPase_1
DUF6833
AAA_25
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AQY68462
LinkDB
All DBs
Position
complement(5809619..5811688)
Genome browser
AA seq
689 aa
AA seq
DB search
MSLSPLPLEALMPLSRAADLVQLFERWVERGWLRALDKAFVGFLHELDPQADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGTMLLPSQLLAGLDGAHWCHALAA
SPLVALAVDGSEAAQSRPLVLSGKRLYLRRYWTYERRIDTALRLRLATAESLAADLPQRL
NGLFDQAPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPAVEAGSP
LRIRLAAPTGKAAARLTESISQQVLSLNVPDDVREKIPTQVTTVHRLLGSRPGTRHFRHH
LGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGWYSADTRRWLQAVSGEDLGNSGLQEDRDGSHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARRLLAAGSHRDLFCVSLKGEHDHALERLVLDGPGDGAEGYRAYLNLLHA
ARPSLDTPRDDPAWTHWAQQLLHAFDAFQLLCAVRKGPWGVEGLNLRITAALRKARLIDG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESAGGPHVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGHEPGKPD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtcgccgttaccgctggaggcactgatgcccctcagccgcgccgccgatctg
gtgcaactgttcgaacgttgggtcgagcgtggctggctgcgcgcgctggataaggcgttc
gtcggctttctgcacgaactcgacccgcaggccgaccccttggtgttgctggccgcggcc
ctgaccagccatcaactgggccacggccatgtgtgcctggacctgttcgagaccctcaaa
gcaccggatttcgccctgtccctgccgccggaaggcgacctgcaaaccggcaccatgctg
ctgccgtcgcaactgctcgcgggcctggacggcgcgcattggtgccacgccctggccgcc
agccccttggtcgcgttggccgtcgacggcagcgaggccgcacaaagtcgcccgttggtg
ctgtctggcaaacgcttgtacctgcgccgctattggacctacgaacgacgcatcgacacg
gccttgcgcctgcgcctggccacagcagaaagcctcgccgccgatctgccccagcgcctg
aacggcctgttcgaccaagcgccgcccgatggcgtgatcgactggcagaaactcgcctgc
gccctggccactcgcggggcgttcagtatcgtcaccggcggccccggcaccggcaagacc
accaccgtggtgcgcttgctcgcgctgttgcaggcgccggccgtggaagccggcagcccg
ttgcgcattcgtctggcggcgcccaccggtaaagccgccgcacggcttaccgagtccatc
agccagcaagtgctgtcgttgaatgtgcctgacgacgtgcgggaaaaaatcccgacccag
gtcaccaccgtccaccgcctgctcggcagccgcccgggcacccgccacttccgtcatcac
ctgggcaatccattgccgctggatgtgctggtggtggatgaagcctcgatgatcgacctg
gaaatgatggccaacctgcttgatgccttgccgccccacgcacgcttggtgctgctgggc
gacaaggaccaactcgcctcggtcgaggctggcgccgtactcggcgacctgtgccgcgac
gccgaggccggctggtacagcgccgacacccgccgatggctgcaagcggtcagcggtgaa
gacctgggcaacagcggcctgcaggaagaccgcgacggcagccatccgctggcccagcaa
gtggtgatgctgcgctactcgcggcgcttcggcgaaggcagcggcatcggccaactggcg
cgttgggtcaaccagcagaacgccgaagaagcccgacggttactggccgcgggcagccac
cgcgacttgttctgcgtcagcctcaagggcgaacacgaccacgcattggaacgcctggtg
ctggacgggccgggcgatggcgccgagggctaccgtgcctacctgaacctgctgcacgcc
gcgcgcccgtctctcgacaccccgcgtgacgaccccgcctggacccattgggcgcaacaa
ctgctgcacgccttcgacgccttccaactgctctgcgccgtgcgcaagggcccttggggc
gtggaagggctgaacctgcgcatcaccgccgccttgcgcaaagcgcggctgatcgacggc
gacgagcagtggtacgaaggccgcccggtgctgatgacccgcaacgattacggactgggc
ctgatgaacggcgacatcggcatcgccctgaaattgcccgaaagcgccggcggcccccac
gtgttgcgcgtggccttcccgcgtaacgacggccagggcggcgtgcgctttgtgctgccc
agccggctcaacgatgtggaaaccgtgtacgccatgaccgtgcacaaatcccagggctcc
gagttcacccacaccgcgttgatcctgccggacgcgctgaacccggtgctcaccaaagaa
ctgatctacaccggcatcacccgcgccaagcgctggttcagcctgatcgagccacgcggc
ggggtgttcgaagaagccgtgcggcgcaaggtcaagcgcttgagcgggttgatgctggag
ttggggcatgagcccgggaaacctgactga
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