Pseudomonas veronii: PverR02_26555
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Entry
PverR02_26555 CDS
T04853
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PverR02_26555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_26555
Enzymes [BR:
pvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PverR02_26555
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PverR02_26555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
AAA_12
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AQY68463
LinkDB
All DBs
Position
complement(5811685..5815359)
Genome browser
AA seq
1224 aa
AA seq
DB search
MSSKPLALAFPLKGSQLIEASAGTGKTFTISALYLRLVLGHGGDDAGFGRELLPPQILVV
TFTDAATKELRERIRIRLAEAARFFRDEIQQPDALIAELRDQYPPAQWPACANRLDIAAQ
WMDEAAVSTIHSWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHDDA
LNWVRNNWGGPAALMPRVRALFGSERPSGESREPAELIAACLQERRAALVALKAPWQQWA
DELREICLQAVAAKAVDGRKMQARYFEPWFEKISAWAADESLEQLDIGTGFTRLTPDGMA
EAWKGEPPHHPGIDAMASLKASLDALPTPDAAVLQHAAAWVGKRFEDEKRRRAEMGFDDM
LIRLNAALQSDGGERLASVIREQFPVALIDEFQDTDPVQYSIFDSIYRIEENHLDSGLFL
IGDPKQAIYAFRGADIYTYLRARQSTTGRHHTLGTNFRSSHAMVEAVNHVFQRAETGRGA
FLFRKPSGENPVPFQPVLSQGRKEQLQVEGQTLPALNLWHLPTDQPISNAVYRQQLAAAC
ATQIVELLNGGQQGRAGFLHADGSFDGVLPSDIAILVRDGKEAQAVRGELAARGVRSVYL
SDKDSVFAAQEAHDLLAWLKACAEPDVERPLRAALACVTLNLSLPELERLNQDELAWESR
VMQFRGYRAIWRSQGVLPMLRRLLHDFKLPQTLIARSDGERVLTNLLHLSELLQQAASEL
DGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYDLVFLPFICSAK
PVDGSRLPLHYHDANGKSQVSLRPTTELIAQADDERLAEDLRLFYVALTRAKHACWLGIA
DLKRGNNSSSVLHLSALGYLLGAGAALAESAGLARWLLDLQAGCAAVHYAPMPEAHASVF
HPPRNEATLLAPLLPKRKAAENWWIASYSALRIGDSMSAANLEAPESPQAQKLFDDERLD
PDAPREAAASGSDIHRFPRGPNPGTFLHGLLEWAGEDGFDVTPQAIEKAVGARCNRRNWE
GWIITLSGWLGHLLQTPLPLDNDQVTLSGLQHYQIEMEFWFASHRVDVLALDKLVCQYTH
NGVSRVAAEPVLLNGMFKGFIDLTFEHDGRYYVADYKSNWLGPDDSAYTQDAMEQSILEH
RYDLQYVLYLLALHRQLKARLPDYDYDRHVGGALYLFLRGTRAASQGAYFTRPPRALIES
LDLMFQGQSLPPRAEPAWEQGVLL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaaacccttggccctggccttcccgctcaaaggcagccagctgattgaagcc
agcgccggcaccggcaagaccttcaccatttccgccctgtacctgcgcctggtgctcggc
cacggtggcgatgacgccggcttcggccgcgaactgctgccgccgcagatcctcgtggtg
accttcaccgacgccgccaccaaggaactgcgcgaacgcatccgcatccgcctggccgaa
gccgcgcggttctttcgcgatgagatccaacagcccgacgccctgatcgccgaactgcgc
gatcaatacccgcctgcgcaatggccggcctgtgccaaccgtctggacatcgccgcgcaa
tggatggacgaagccgccgtttcgaccatccacagttggtgccagcgcatgctgcgcgaa
cacgcctttgacagcggcagcctgttcacccagaccctggaaaccgaccacagcgacctg
ctcggcgaagtgctacgcgactactggcggctgttttgctacccgatgcacgacgatgcg
ctcaactgggtgcgcaacaactggggtggcccggccgcgctgatgccacgggtgcgtgcg
ctgttcggcagcgaacggcccagcggcgaaagccgcgagccggccgagttgatcgctgcg
tgcctgcaagaacgccgcgccgccctggtcgccctcaaggcgccgtggcagcaatgggcc
gacgagttgcgcgagatctgcctgcaagccgtcgccgccaaagccgtcgatgggcgcaag
atgcaagcgcgttacttcgaaccctggttcgaaaagatcagcgcctgggccgcggacgaa
tccctcgaacaactggacatcggcaccggcttcacccgcctgaccccggacggcatggcc
gaagcctggaagggcgagccgccgcaccacccgggcatcgacgccatggccagcctcaag
gccagcctggatgcgctgcccacccccgacgccgccgtgttgcaacacgccgccgcgtgg
gtcggcaaacgcttcgaagatgaaaaacgccggcgcgccgaaatgggcttcgacgacatg
ctgatccgcctcaacgccgccctgcaaagcgacggcggcgagcgtctggcgagcgtgatc
cgcgaacagttcccggtcgccctgatcgacgagttccaggacaccgacccggtgcaatac
agcatcttcgacagcatctaccgcatcgaagaaaaccacctcgacagcggcctgttcctg
atcggcgaccccaagcaggcgatctacgccttccgtggcgccgacatctacacctacctg
cgcgcgcgccaatccaccaccggccggcatcacaccctgggcaccaacttccgctccagc
cacgcgatggtcgaggcggtcaaccatgtgttccagcgtgcggaaaccgggcgtggcgcg
tttctgttccgtaagccgagtggcgaaaacccggtgccgttccagccggtgctgtcccaa
ggccgcaaggagcaactgcaggtcgagggtcagacgctgcccgcgctgaacctctggcac
ctgcccaccgatcagccgatttccaacgcggtttatcgccagcaactggcggctgcctgc
gccacacagattgtcgaattgctcaacggcgggcagcaaggccgcgctggtttcctacac
gccgacggtagcttcgatggcgtgttgccgtcggacatcgccatcctcgtgcgcgacggt
aaggaagcccaagccgtgcgcggtgagttggccgcccgtggcgtgcgcagcgtgtacctg
tcggacaaggactcggtgttcgccgcccaagaggcgcacgacctgctggcctggctcaag
gcctgtgccgaaccggacgtcgaacgcccgctgcgcgccgcgctggcttgcgtcaccttg
aacctgtcactgccggaacttgagcgtctgaaccaggacgaactggcgtgggaaagccgt
gtgatgcagttccgtggctaccgcgcgatctggcgcagccaaggcgtgctgccgatgctg
cgtcgcctgcttcacgacttcaaactgccgcaaaccctgatcgcccgcagcgatggcgag
cgcgtgctgaccaacctgttgcacctcagcgaactgctgcaacaggcggcctccgaactg
gacggcgaacaggccttgatccgccacctggccgaacacctcgcgctgtcggggcaggcc
ggtgaagaacagatcctgcgcctggaaagcgacgagcaactggtcaaggtggtgaccatc
cacaaatccaagggcctggaatacgacctggtgttcctgcccttcatctgctcggccaaa
ccggtggatggcagccgcttgccgctgcattaccacgatgccaacggcaagtcgcaggtt
agcttgcgcccgaccaccgagttgatcgcccaggccgatgacgagcgcttggcggaagac
ctgcgtctgttctacgtcgccctgacccgcgccaaacatgcgtgctggctgggcattgcc
gacctcaagcgcggcaacaacagcagctcggtgctgcacctgtcggcgctgggctatttg
ctcggcgccggcgccgcgttggcggagtccgccggcctggcgcgctggttgctggacctg
caggcaggctgtgccgccgtgcattacgcgccgatgcccgaagcccacgccagcgtcttc
cacccgccgcgtaacgaagccacgctgctcgcgcccttgctgcccaaacgcaaggctgcg
gaaaactggtggatcgcgtcctacagcgccttgcgcatcggcgacagcatgagcgccgcc
aaccttgaagcgccggaaagcccgcaagcccagaagctgttcgacgacgaacgcctcgac
cctgacgcaccgcgtgaagcggctgcgtccggcagcgatattcaccgtttcccacgcggc
cctaaccccggcaccttcctccatggcctgctggagtgggcgggcgaagacggcttcgac
gtgaccccgcaggctatcgaaaaggccgtgggcgcgcgctgcaaccgccgcaactgggaa
ggctggatcatcaccctcagcggttggctcggccatctgctgcaaacaccgctgccgctg
gacaacgatcaggtcacgctcagcggcctgcagcactaccagatcgaaatggagttctgg
ttcgccagccatagagtcgacgtgctcgccctcgacaagctggtgtgccagtacacccac
aacggcgtctcccgcgtcgcagcggaaccggtgttgctcaacggcatgttcaaaggcttc
atcgacctgaccttcgagcacgacggccgttactacgtggccgactacaaatccaactgg
ctcggccccgatgattcggcctacacccaggacgccatggaacagtcgatccttgagcat
cggtacgacctgcaatacgtgctttacctgctggccctgcatcgccaactcaaggcgcgc
ctgccggattacgactacgaccgccatgtcggcggcgcgctctatctgttcctgcgcggc
actcgggccgccagccagggggcgtacttcacgcggccgccacgggcgctgatcgagagc
ctggacctgatgttccaaggccaatcgttaccgcccagggctgagcccgcctgggaacaa
ggagtgttgctatga
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