Pseudomonas veronii: PverR02_27345
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Entry
PverR02_27345 CDS
T04853
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr00260
Glycine, serine and threonine metabolism
pvr00460
Cyanoamino acid metabolism
pvr00630
Glyoxylate and dicarboxylate metabolism
pvr00670
One carbon pool by folate
pvr00680
Methane metabolism
pvr01100
Metabolic pathways
pvr01110
Biosynthesis of secondary metabolites
pvr01120
Microbial metabolism in diverse environments
pvr01200
Carbon metabolism
pvr01230
Biosynthesis of amino acids
pvr01240
Biosynthesis of cofactors
pvr04981
Folate transport and metabolism
Module
pvr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PverR02_27345 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PverR02_27345 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PverR02_27345 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PverR02_27345 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PverR02_27345 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PverR02_27345 (glyA)
Enzymes [BR:
pvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PverR02_27345 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AQY68601
UniProt:
A0A0R3AS61
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All DBs
Position
6000809..6002062
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AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAVRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANAEIEKKLNSAVFPGSQGGPLEHVIAAKAVCFKEALQPEFKTYQQQVVKNAKAMAEV
FIARGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNDAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccattgccaagtacgacgccgatctcttcgccgccatggag
caagaagccgtgcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtaatggaggctcaaggttcggttctgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggcggctgcgaatacgtcgacgtggttgagcaactggccatcgac
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccacacgccggctcccaa
gccaacagcgccgtgtacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcgtcctccggcaagctgtac
aacgccgttcaatacggtatcgatgccaacggcctgatcgactacgacgaagtcgagcgc
ctggcggtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgacttcccacgtttccgcgccatcgccgacaaagtgggcgcgtacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccgttcgct
gacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatcctg
gcgcgcgccaacgccgagatcgagaagaagctcaactctgcggtattcccaggctcccaa
ggcggcccgctggaacacgtgatcgccgccaaagcggtctgcttcaaagaagccctgcag
cctgagttcaagacttaccagcaacaagtggtgaaaaacgccaaggccatggccgaagtg
tttatcgcacgcggttttgacgtggtctccggcgggactgaaaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagatgctgacgccgccctgggcaaagccttc
atcaccgtgaacaaaaactccgtgccgaacgacccacgttcgccgttcgtcacctcgggc
ctgcgtttcggcaccccggccgtgaccactcgtggcttcaaggaagcagagtgcaaggag
ctggccggctggatctgcgacatcctggctgacctgaacaacgacgccgtgatcgacgcg
gtccgtgagaaggtcaaggccatctgcaaaaagctgccggtgtacggcgcttga
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