Pseudomonas veronii: PverR02_27930
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Entry
PverR02_27930 CDS
T04853
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvr
Pseudomonas veronii
Pathway
pvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PverR02_27930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvr03021
]
PverR02_27930
Transcription machinery [BR:
pvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PverR02_27930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_r2
HTH_24
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AQY68713
LinkDB
All DBs
Position
complement(6117921..6118439)
Genome browser
AA seq
172 aa
AA seq
DB search
MFPTLPANQDPRQQALHRLFGEHHSWLLERLRLRLHCREDAADMAAETFAQIVALPDPHA
IREPRALLSLIGKRLMFARWRRNDVERAYLEALASLPELTVPSPEEHWVVMEALMAVDQL
LDGLSSKARAAFLYSQIDGLTYACIAEELGVSVTRVHQYVVQGLTACYRGVP
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcctactctcccggcaaaccaagatccccgccagcaggcgctccatcgcttgttc
ggcgagcaccatagctggctgctcgaacgtctgcgtctgcggctgcactgccgcgaggat
gccgccgatatggccgccgaaaccttcgctcagattgtggcgctgcctgatccccatgcc
attcgagagcctcgggcgttgttgagcctcattggcaagcggctgatgtttgcccgctgg
cggcgcaatgatgtcgaacgtgcctatctcgaagccctagcctctttgccggagctgacc
gtgccttcgcccgaggaacactgggtggtgatggaggcgttgatggcggttgatcagttg
ttggatggcttgtcgtccaaggcgcgcgcggcttttctatatagccagatcgatgggctg
acttacgcgtgcatcgccgaggagctgggggtgtcggtgacgcgggtacatcagtatgtt
gtgcagggactgacggcgtgttatcggggcgtgccgtga
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