Pseudomonas veronii: PverR02_29685
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Entry
PverR02_29685 CDS
T04853
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PverR02_29685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_29685
Enzymes [BR:
pvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PverR02_29685
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PverR02_29685
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PverR02_29685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AQY69046
UniProt:
A0A0R3B8X9
LinkDB
All DBs
Position
complement(6476578..6477390)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRERRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSQD
PHNHELLIRLGPEPLTDLFDGERLFKLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRGRYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEACKVCGSELRNVVLGQRASVFCPKCQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttaccagaagtcgaaaccactcggcgcgggattgcgccgcacctggaaggc
cagcgggtcagccgcgtcgtggtgcgcgagcggcgcctgcgctggccgatcccggaagac
ctcgatgtacgcctgtccgggcagcgcatcgtgctggtggaacggcgggccaagtacctg
ttgatcaacgccgaagtgggcaccctgatcagccacctgggcatgtcgggcaacctgcgc
ctggtggaagtcggcctgccggcggccaagcatgagcatgtggacatcgagctggagtcg
ggcctggccctgcgctacaccgaccctcggcgttttggcgcgatgctctggagccaggac
ccgcataaccacgaactgctgatccgcctggggccggagccgttgaccgacctgttcgat
ggcgagcgcctgttcaaactgtcccgtgggcgttcgatggcggtcaaaccgttcatcatg
gacaacgcggtggtggtgggcgtgggcaatatctacgcgaccgaagcgctgttcgcggcg
gggatcgatccgcgccgcgaggccggtggcatttcacgcgggcgctatctgaagctggcg
atcgagatcaagcgcattctggcggccgccatcgagcgcggcggcaccaccttgcgcgac
tttatcggtggcgatgggcagccggggtatttccagcaggaactgttcgtctacggccgg
ggcggcgaggcgtgcaaggtctgcgggagcgagttgcgcaatgtggtgctggggcagcgg
gcgagtgtgttttgccctaagtgtcagagctga
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