Pseudomonas veronii: PverR02_30620
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Entry
PverR02_30620 CDS
T04853
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pvr
Pseudomonas veronii
Pathway
pvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PverR02_30620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvr03400
]
PverR02_30620
Enzymes [BR:
pvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PverR02_30620
DNA repair and recombination proteins [BR:
pvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PverR02_30620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AQY69222
LinkDB
All DBs
Position
6669615..6670394
Genome browser
AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPTQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgttaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgcctgcaggacacccgcgcctccgcc
tttgaactggacgatccagccttccaactggatggctacttcctttatgcctgcgatgcc
gaagtgcccacccaaggtggcgtggctttgtactcgcggttgcaacccaaggcggtcatc
agcggcctcggcttcgagacagccgaccgctacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccttcggggcagaacggcgatgaagacttgaac
cagaagttcaagctaatggacgacttcgcccgttatctggataaacagcgacgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatccccgggcttcctggcgccggaacgggcctggatggacgag
attgtcggcaacatgggctatgtcgatgccctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccagacaacgaacaggctgagatgctcaacctgggctggcgtttcgac
taccagctgctgaccccgggcctgcgtcgctttgtgcgcagcgcacgcctgccacgccag
ccgcgcttctcgcagcacgcgccgctgatcgtggactatgactggacactgaccatctga
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