Pseudomonas veronii: PverR02_30820
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Entry
PverR02_30820 CDS
T04853
Name
(GenBank) type IV secretion protein Rhs
Organism
pvr
Pseudomonas veronii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Tox-URI2
Motif
Other DBs
NCBI-ProteinID:
AQY69259
LinkDB
All DBs
Position
6715988..6720334
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AA seq
1448 aa
AA seq
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MSDALWAARMGDALAHTSMMADILGGVLEVAANIAITAVATAAVVAATGITVATGGLGCF
LLGAVVGTIVGLAMSKTGADKGLTNLCDSFSNALFPPTVQANILTGSTDTLTNNIPAARA
AGAISSHVAPAGTELEAPEPEPEASYLDMAESFFSQMWRPTVATPAPGAVPKPLDLVACM
KHPPMPPQFLAEGSSKVTINGQPAVRSGDRSTCDASVVSSGLISSNVTIGGGSVVVREIR
SGKTPGVGLAVTALLMLKGGKGKFFSKLPCMLIGGATSMAVSSAMGAMANAAMGSSNPVH
AATGAKVLGDVEELDFVLPGILPIDWQRIYNSRDERPGSLFGAGWSVAYEVCVEVRPHPD
GGDTLVYTDEQGRPIDMGSIALGGAVFSAGEGLSVRRHLNGQLLIESDDGLYRLFEPTPT
NAGLLRLTQLGDRNDNRIHVDYDAAGRLVRLRDTFDLVQVELVRERERVTHIERIYPDQR
REVLVSYTYDTAGNLAEVRDTTGQVQRRFAYDAGRRMVEHQLPTGLRCFYEWALVEDLEW
RVVRHWTDEGDAYQFDYDLKAGLTRITDGLQRVSSRHWNTQHQIIHYSDNLGQTWLFEWN
DERQLLSATDPQGGRYAYSYDEAGNLIGDSDPLGRSDSTLWLEHWALPLVETDAAGRSWQ
YRYDPRGNCIAETDPLGHITRYRYDAHGQVVEIVDATGKRKKLRWNPFGQLVEHIDCSGY
PTRFSYDERGYLQVITDALGERTQFSYDANGRLLSSQLPDGRIERYQRDASGQLVGYTDP
AGHTTLYQHNRRGQVRQRTDAHGRQVQFGYDSYGRLQALVNENGESYRFAWDAGDRLIQQ
QDLDGSAKRYTYDRLDNITAVTAAAAPYGNGLAIVPEEPPAPIIHRLERDAVGRLIAKTT
DDGRTDYSYDAVDQLTAVTFTDLQGNTQALGFAYDALGQLLAEQSSAGNLHHHYDELGNL
IQTQLPDGRWLNRLYYGSGHLHQINLDGQVISDFERDRLHREVLRTQGQLSTRSEYDRSG
RLRARQRRHASQPSLMPAATQKHFEYDPADNLIGKLDQQPAAQHRHLLHYDATGRIIASQ
DNLHGQRETFAYDAAANLLDGPQPGAGLVVHNKLLTYQDKRYRYDAFGRMIEKRSAKRGV
QRFAYDAESRLIEVRNENGSVLRMTYDPLGRRIEKTEHGRDGYPLGETRFMWDGLRLLQE
HKHSQTSLYVYEDEGYEPLARVDGIGPLQKIRYYHNDLNGLPEQLTETDGETVWRATYRV
WGNTLEEVREPYYIEEQNLRFQGQYLDRETGLHFNTFRFYDPDVGRFTTPDPIGLTGGIN
LYKYAQNPISWIDPWGLLNLNTNGAAGNFGVYEIRIDGELYKYGKADMNRVTKSSGNPTR
LHQQVEKLERLNPGKTIKGTVLESGISTTQAAKTIETAKLDAHYKKTGGLIPEGNKKSYK
GPKSLCGK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcactctgggccgctcgcatgggcgatgcactggcccacacctcgatgatg
gccgacatcctcggcggtgtgctggaggtggctgccaatatcgcgatcactgcggtggcg
actgcggccgtggttgccgccactggcattaccgtcgccaccggcgggcttggctgcttc
ctgttgggcgcggtggtgggcacgattgttggcctcgccatgagcaagaccggtgcagac
aaaggcctgacgaatttatgcgatagcttcagcaatgcccttttcccgcccacagtacag
gcgaatattctcaccggctcaaccgataccctgactaacaacatccctgccgcccgggcc
gccggggcgatcagctctcatgtggcgccggcaggcaccgaactggaagcacccgagccg
gaacccgaggccagttatctggacatggccgaaagtttcttctcgcagatgtggcgcccc
acggttgccactccggcgccaggcgccgtgccaaagccgttggacttggtcgcgtgcatg
aagcatccaccgatgccgccgcagtttctcgccgaaggttcgtccaaggtcacgatcaat
ggtcaaccggcggtgcgcagcggcgaccgcagtacgtgcgacgccagcgtggtgtcttcc
gggctgatttcatccaacgtgacgattggcggcggctcagtggtggtgcgggaaatccgc
agcggcaagacacccggcgtcgggctcgcagtcacggcgttgttgatgctcaagggcggc
aagggcaagttcttcagcaagctgccgtgcatgctgatcggcggcgcgacttcgatggcg
gtcagcagtgcaatgggcgcgatggccaacgcggccatgggctcgtccaacccggtgcat
gcggcgaccggcgcgaaagtgctgggcgatgtcgaggagctggatttcgtgctgcccggc
atcctgccaatcgactggcaacgcatctacaacagccgcgacgaacgccccggcagtctg
ttcggcgcgggctggagtgtcgcctatgaggtgtgcgtcgaggtccgccctcatcccgac
ggcggcgatacgctggtctacaccgatgagcagggccgaccgatcgacatgggctcgatt
gccctgggcggcgcggtgttcagtgccggtgaaggactctccgtgcggcgccacctcaac
gggcagttgctgatcgaaagtgatgacggcctgtaccggctgttcgaaccgaccccgacc
aatgctggcttgcttcgcctgactcagctcggtgaccgcaacgacaaccgtatccacgtc
gactatgacgccgccgggcgcctggtgcgcctgcgcgatactttcgatctggtgcaagtc
gaactggtgcgcgagcgtgaacgcgtcactcatatcgaacgcatctatcccgatcaacgc
cgcgaagtgctcgtcagctatacctacgacacggcgggaaatctggctgaggtacgcgat
accaccggccaggtgcagcggcgcttcgcctacgacgccgggcgccggatggtggagcat
cagttgcccaccgggttgcgttgcttctatgaatgggcgctggtcgaagacctggaatgg
cgcgtggtccggcactggaccgacgagggtgacgcctaccagttcgactatgacttgaaa
gccggcctcacccgcattaccgacggcttgcaacgcgtcagcagccgccactggaatacc
cagcaccagatcattcactacagcgacaacctcggccagacctggttgttcgagtggaac
gacgaacgccaattgctcagtgccaccgatccacagggtgggcgctacgcatacagttac
gacgaggccggcaacctgatcggtgattccgacccgctgggccgcagcgattcgacgctg
tggctggaacattgggccttaccgctggtggaaaccgacgccgccggccgcagctggcag
tatcgctacgacccgcgcggcaactgcatcgccgaaaccgatccgctgggtcatatcact
cgctatcgctacgacgcccatggacaggtcgtggaaatcgtcgacgccacgggtaaacgc
aagaagctgcggtggaatccgttcgggcaactggtcgagcacattgactgctcgggttac
cccacgcgcttcagctatgacgagcgaggctatttgcaggtcatcaccgacgccctcggc
gaacgcactcaattcagctatgacgccaacgggcgtttgctcagcagccaactgccggac
ggacgcattgagcgctatcagcgcgatgccagcggccagttggtgggctacaccgacccg
gccgggcacaccacgctctaccagcacaaccgtcgtggccaggtacgccagcgcaccgac
gcccatggacgacaggtgcaattcggctatgacagctacgggcggctgcaagcgctggtc
aacgagaacggcgaaagctatcggttcgcgtgggatgcaggggatcggctgatccaacaa
caagacctcgacggcagcgccaagcgctacacctacgaccggctggataacatcacggca
gtgaccgccgctgcggcgccttatggcaatggcttggcgatagttcccgaggagccaccg
gcccccatcattcatcggctggagcgcgatgcggttggccgattgattgccaagaccacc
gacgatggccgcaccgactacagctacgatgcagtggaccagctaaccgccgtcaccttc
accgacttgcagggcaatacccaggctcttggtttcgcttacgacgcccttggccagttg
cttgccgaacaaagttcagcgggcaatctgcaccatcactacgacgaactcggcaacctg
atccaaacccaactgcccgacggccgctggctcaatcgcctgtactacggcagcggccac
ctgcaccagatcaacctcgacggccaggtcatcagcgacttcgaacgcgaccgcctgcac
cgcgaagtgctgcgcacccaaggccaactcagcacccgcagcgaatacgaccgcagcggc
cgcctgcgcgcacgccagcgccgccacgccagccagccctcgttgatgccagcggccacg
caaaaacacttcgagtacgaccccgccgacaacctgatcggcaaactcgaccagcaaccc
gcagcgcaacatcgccacctgctgcactacgacgccaccggccgcatcatcgccagccag
gacaacctgcacggccagcgcgaaaccttcgcctacgacgcggccgccaacctgctcgac
ggcccgcaacccggcgccgggctggtggtgcataacaagctgctgacctaccaggacaag
cgttaccgctacgacgcctttggccgcatgatcgaaaaacgcagcgccaaacgcggcgtg
cagcgctttgcctacgacgccgaaagccggctgattgaagtacgcaatgaaaacggcagc
gtgctcaggatgacctatgacccgctgggccggcgcattgaaaaaaccgagcatggccgc
gacggctatccgctgggcgaaacccggttcatgtgggatggcctgcggttgttgcaggag
cataaacacagtcagacgagcctgtatgtctatgaagacgaaggctacgaacccttggcc
cgagtcgacggcatcggcccgctgcagaaaatccgctactaccacaacgatctgaacggg
ttgccggagcaactgaccgaaacagatggagaaacggtgtggcgcgcgacgtatcgggtg
tggggcaacacactggaggaggtgcgcgagccttattacattgaagagcagaatttgcgg
tttcaggggcagtatctggaccgggagacggggctgcatttcaatacgtttaggttttat
gatccggatgtggggcggtttactacgccggatccgattgggttgacggggggaatcaac
ctctacaaatacgcacaaaatcccatctcttggattgacccatggggacttcttaatctc
aacaccaacggcgctgcaggtaatttcggtgtgtacgaaattcgaatagacggtgagctg
tacaagtacggcaaggccgatatgaaccgtgtaacaaaatccagcggcaacccgaccaga
cttcaccaacaagtagaaaaattagaacggctgaatcctggtaaaacgattaagggtacc
gttctagaaagcggcataagcacgacccaggcggccaagaccatcgaaactgccaaattg
gatgcacattacaaaaaaactggcggactgattcctgaaggaaacaaaaagagctataaa
ggccctaaatcgctatgtggcaaataa
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