Candidatus Planktophila versatilis: A1sIA79_00430
Help
Entry
A1sIA79_00430 CDS
T05250
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_00430
Enzymes [BR:
pvs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A1sIA79_00430
DNA repair and recombination proteins [BR:
pvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A1sIA79_00430
Prokaryotic type
A1sIA79_00430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASY16743
LinkDB
All DBs
Position
86222..87577
Genome browser
AA seq
451 aa
AA seq
DB search
MRNIIWFRRDLRIGDHPALLAAMENSDEIVPLFILDKAQIAEAGEKLLAYMGQSLRALDQ
SLGNTLHIIEGDQVEVLKELIARYDVKEVHISAEYERYGAARDARVEAAGIPLVRTGSPY
AVAPGRVRKPSDDTPYKVYTPFYRAWCTHGYRSPAATPKNIKAPTPPAEYRAFPDFVMPA
DVHVIEAGEAAALKRFKEFSKKGLDSYDENRNFAGIDGTSKMSTYLKFGEIHPRTLLADL
GESKAHDTFRKEIAWREFYADVLCNNPDTDTEYYAPKFKEMRYDKPGKQFKAWCEGKTGY
PFVDAAMRQLVQEGWMHNRTRMVVASFLVKDLHLEWQLGERFFAEHLVDYDVASNAHGWQ
WTAGTGTDASPYYRVFNPIEQGRRFDENGDYIRKYVPELAHLSAAEIHEPWLFLDGYSHN
YPERIVDHAVERIESLERLKEIKADKPEKPL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacatcatctggtttcgccgcgaccttcgcattggtgatcatccggcgctgcta
gcggcgatggaaaacagtgatgaaattgtgccgctctttattttagataaggcacagatt
gctgaagccggggaaaaactacttgcctatatggggcaatctctgcgcgcacttgatcaa
tcactgggcaataccttgcacatcattgaaggcgatcaagttgaagtcttgaaggagttg
attgcacgttatgacgtcaaagaagttcatatttcggctgagtatgaacgctacggtgca
gcgcgtgatgcacgtgttgaagctgcgggaattccactagttcgtaccggctccccatat
gcagttgcgccaggtcgggttcgtaaaccaagtgatgacacaccgtacaaggtctacaca
cctttctatcgcgcatggtgcacacatggctatcgctcacctgctgcaacaccaaaaaac
attaaggctcccactccaccagctgagtaccgagcatttccagattttgttatgccagct
gatgtacatgtgattgaagcaggggaggcagcagcgcttaagcggtttaaagagttttct
aaaaaaggtcttgattcctacgatgagaaccgcaactttgccggcattgatggcacctca
aagatgagcacctatttgaaatttggtgagatccacccacgcaccttgctggcagattta
ggtgagagcaaagcacatgacacattccgcaaagagattgcctggcgcgagttctatgcc
gatgtgctctgtaataacccagatactgataccgagtactacgcaccgaaatttaaagag
atgcgttatgacaagccaggaaagcaatttaaagcatggtgtgaaggaaagactggctat
ccatttgtcgatgctgccatgcgccaattagtgcaagaaggttggatgcataatcgcacc
cgcatggtggtggcatcatttcttgttaaagatctgcatttagagtggcagttaggtgag
cgcttctttgccgagcacctagttgattacgatgttgcatcaaatgcacatggttggcaa
tggacggctggtactggcaccgatgcctctccttattaccgcgtctttaatccaatagaa
caaggccggcgctttgatgaaaacggtgattacattcgcaaatatgtgccagaacttgcg
catttaagtgcggctgaaattcatgaaccttggctattccttgatggatattcacataac
tatccagagcgcattgtcgatcatgcagtagaacgcattgagtcactcgagcgattgaaa
gagattaaggcagataagcccgaaaaaccgttgtag
DBGET
integrated database retrieval system
