Candidatus Planktophila versatilis: A1sIA79_01160
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Entry
A1sIA79_01160 CDS
T05250
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs00260
Glycine, serine and threonine metabolism
pvs00630
Glyoxylate and dicarboxylate metabolism
pvs00670
One carbon pool by folate
pvs00680
Methane metabolism
pvs01100
Metabolic pathways
pvs01110
Biosynthesis of secondary metabolites
pvs01120
Microbial metabolism in diverse environments
pvs01200
Carbon metabolism
pvs01230
Biosynthesis of amino acids
pvs01240
Biosynthesis of cofactors
pvs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
A1sIA79_01160
09102 Energy metabolism
00680 Methane metabolism
A1sIA79_01160
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A1sIA79_01160
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
A1sIA79_01160
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
A1sIA79_01160
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
A1sIA79_01160
Enzymes [BR:
pvs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
A1sIA79_01160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Phage_HCP
DUF1815
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ASY16873
UniProt:
A0ABM6MD97
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All DBs
Position
230287..231549
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AA seq
420 aa
AA seq
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MSETFYGPDFTLLSKQDPDIAAVLLSELKRQQTNLQLIASENFTSRAVLAALGSTLSNKY
AEGYPGKRYYGGCEEVDKAENIAIERAQSLFGAEHANVQPHSGASANIAVYQAFTKPGDT
VLAMSLPHGGHLTHGSKVNFSGKWFNIVSYGVRQDNELIDYDELRDLAIANKPKMICSGA
TAYPSLIDFEKVRAICDEVGAIMWVDAAHFIGLVAGKAIPSPVPYADVVSFTTHKVLRGP
RGGMILSKAEHAAAIDKAVFPGMQGGPIMSAVAGKAIALAECATPAYQKYAKDVIVNAQS
LAAALEAEGMRAVSGGTQTHLALIDIRSTGVNGKVADERCGAAGIVLNKNSIPYDPEAPS
VTSGIRVGTPATTTQGMGTGEMKTIASLIARAIKTDDASAHAAIKSEVHALTARFPIYEA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaccttctatggcccagatttcacacttctttccaagcaagaccctgatatt
gctgcggtgttgctctcggaactcaagcgtcaacagaccaatctgcaactgattgcttcc
gagaacttcacatcacgggcggtacttgcagctctcggttcaacgctatcgaataaatat
gcggaaggttatccgggcaagcgttactacggtgggtgtgaagaagttgataaggccgag
aatattgcgatcgagcgcgcacagtctctctttggtgcagagcatgcaaatgtgcaaccc
cattcaggtgcgagtgcaaatatcgctgtctatcaagcatttaccaagccaggagatacc
gtccttgcgatgtcacttccacatggtggccacctgacccacggatccaaagttaacttt
tccggtaaatggttcaacatcgtttcttacggcgtgcgtcaagacaatgaacttattgat
tacgacgaactgcgcgacttagcgattgccaacaagccgaagatgatctgttctggagca
actgcctatccatcattaattgacttcgagaaggtgcgcgcgatttgtgatgaagttggg
gcaatcatgtgggtagatgctgctcacttcattggactcgttgccggtaaagcgattcct
tcacctgtgccatatgcagatgtagtttcatttactactcacaaagtactgcgcggccca
cgtggtggaatgattttatccaaggcagagcacgcagcggcgattgataaggcagtcttt
cctggcatgcagggtggtccgatcatgtcggcagttgcaggcaaagcgatcgcacttgca
gagtgtgcaactccggcctatcaaaagtatgcaaaagatgtcatcgtcaacgcacaatca
ttggccgccgcccttgaagcagaaggcatgcgcgcagtttctggtggaacccagacccac
ttggcgctcattgatattcgctccaccggagttaatggaaaagtagctgacgagcgttgt
ggcgcagccggcatagttcttaataagaactcaattccttatgatccagaagcaccatca
gtcacatcaggtattcgcgtgggaacaccagcaactacaacgcagggaatgggaacaggg
gagatgaagacaatcgcatctctgattgctcgcgccattaagacagatgatgcatcggca
catgctgcgattaaatctgaagtccacgctcttaccgcacgttttcctatctacgaggcg
taa
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