Candidatus Planktophila versatilis: A1sIA79_01950
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Entry
A1sIA79_01950 CDS
T05250
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_01950
Enzymes [BR:
pvs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
A1sIA79_01950
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
A1sIA79_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ASY17006
LinkDB
All DBs
Position
complement(374172..375662)
Genome browser
AA seq
496 aa
AA seq
DB search
MSKKDALKRIIYIPFDHLHRNFGALKEANPATDLIAMVESARMTTGRNWHQERLFFLISS
ARHFAQSLETEGFTVEYVKAPTTIAGLKEIAKKYAALPVICAEPSSFRHYEALQSYGAEF
VDNDFFLTPRPLFTQWADEQKSYLMENFYRKQRTRLNVLMDGKEPEGGAWNFDKENRLPP
PKKYEGPAYLEHKRDKIDLEVASELSFTVTPTWATTRKGALKVLQNFIDNHFAEFGPLED
AMTTDNWALHHSLLSPYLNNGLLHPSEVIHAAMKAFKTGAIPIASAEGFIRQLIGWREYV
NGMYWFLGPDYRNNNQLAATRKLLPLFSDPSATQMNCMKEIVGDIQDRAWVHHIPRLMVI
SNLALVTGTNPQEFLDWMREVFIDATEWVMVPNVIGMGVHADGGAMMTKPYAAGGAYISR
MSNYCKPCVYDPKLRVGAKACPFTTLYWDFLDRHKETFAKNHRMSQQVYGLNRLSDLPEL
KMRAKEVLKGLEQGRI
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaagatgcactcaagcggattatctatatcccattcgaccacctgcatcgc
aactttggcgccttaaaagaggccaacccagccactgatctgattgccatggtcgaaagt
gcccgcatgacaactgggcgcaattggcatcaagagcggctcttctttctcatctctagt
gctcgccacttcgcacaatcattagagaccgaaggcttcacagtggaatacgttaaagcg
ccgaccacgatcgctggcttgaaagagattgcaaagaaatatgcagcacttcccgtcatc
tgcgccgagccaagctcttttaggcattatgaagcgcttcaaagctatggcgcagaattt
gttgacaatgatttcttcttaactcctcgcccgctctttactcaatgggctgatgagcaa
aagtcttatttgatggagaacttctatcgcaagcagcgcacccggctaaatgttctgatg
gatggcaaagagcccgaaggtggtgcgtggaattttgataaagagaatcggctgccaccg
cctaagaaatatgagggaccggcatatctagaacacaagcgagataagattgatcttgaa
gtagcgagtgaactttcatttaccgtcaccccaacctgggccactactcgcaagggcgca
ctgaaggtgctgcaaaactttattgacaaccacttcgctgaattcggtccgctcgaagat
gccatgacaactgataactgggcgctgcatcattcacttctctctccttatctgaacaat
ggcctcttgcatcccagtgaagtcattcacgctgcgatgaaggcatttaagacaggtgct
attccaattgcatcagctgaaggtttcatccgccagctcattggctggcgcgagtatgtc
aatggtatgtattggtttcttggccctgattaccgcaataacaatcagttagctgccacc
agaaaactactgccgctcttttctgacccgtctgccacgcagatgaattgcatgaaagag
attgtgggcgatatccaagatcgcgcctgggtgcatcacattccacggctgatggtgatc
tcaaacttagcgctagttactggcacaaacccgcaggaattccttgattggatgcgcgaa
gtttttatcgatgccaccgagtgggtgatggtgcccaatgtgattggtatgggagtgcat
gccgatggcggggcgatgatgactaagccctatgccgcaggtggtgcctatatctctcgt
atgtctaactactgcaaaccatgcgtctatgacccaaagttacgagtcggcgctaaggcc
tgtccctttacgactttgtattgggattttctcgatcgtcataaagaaacttttgctaaa
aaccatcgcatgagccaacaggtgtatggactcaatcgcttaagtgatctgccagagctg
aaaatgcgggcgaaggaagtacttaaagggttagagcaaggaaggatttag
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