Candidatus Planktophila versatilis: A1sIA79_02380
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Entry
A1sIA79_02380 CDS
T05250
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvs03032
]
A1sIA79_02380
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_02380
Enzymes [BR:
pvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A1sIA79_02380
DNA replication proteins [BR:
pvs03032
]
Prokaryotic type
DNA Topoisomerases
A1sIA79_02380
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A1sIA79_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
SelB_WH2
Motif
Other DBs
NCBI-ProteinID:
ASY17086
LinkDB
All DBs
Position
complement(467306..468832)
Genome browser
AA seq
508 aa
AA seq
DB search
MATKKAAAPKKTAKLAGPKPGEFPGKIVDIDVSSEMSESFLEYAYSVIYSRALPDARDGL
KPVHRRILHQMADMGLRPERGHVKSARVVGEVMGKLHPHGDSAIYDALVRMAQSFSMQLP
LIDGHGNFGSLDAGPAAMRYTEARLAPTAMAMVAEADENTVDFGPNYDGQLAEPLVLPAA
FPNLLVNGGSGIAVGMATNMAPHNLGEVIAATKFLIDNPKATLNQLMKHVPAPDFPTGGE
IVGLEGVREAYATGKGSFKVRATTEISKVTSRKMGIVIKELPFNIGPEKVVERIADLAKA
KKIQGISDIIDLTDGQTGTNVVIELKNGFEPEDVLEKLFKLTPMEDAFAINAVALVKGKP
QTLGLKELLQVFIDHRIEVVRRRSEFRKAKAEDRLSLVDGLLKAIIDIDKVIKIIRGSDD
APAAKEALIKGFKLNDEQATYILDMPLRRLTKMSKLELETESKELKGIIAALATLLKSEE
AIRKQVSDELTAVSKAFATPRRTRIGKE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaagaaggcagcagctcccaagaagacggcaaagctggccggaccaaagccg
ggcgaatttccaggcaagatcgttgatatcgatgtctcatccgaaatgtcagaatcattt
cttgaatatgcctattccgttatttactcacgcgcacttcctgatgcacgtgatggttta
aagccagtacatcgccgcatcctgcatcagatggcagatatgggtcttcgccctgagcgc
ggacatgtaaagagcgcccgtgttgttggtgaagtaatgggtaagttgcacccacacggt
gactcagcaatctatgacgcacttgttcgcatggcgcaatctttttctatgcaactgcca
ctgattgacggccacggaaactttggttcactcgatgccggtccagctgcgatgcgttat
accgaagcgcgccttgcccccactgcaatggcgatggtggccgaagcagatgagaacaca
gttgattttggtccaaactatgacggtcaattagcagaaccacttgtacttccggccgca
tttcctaacctgcttgtgaacggtggttctggaattgccgtaggcatggcgacaaatatg
gccccccacaacctgggtgaagtaatcgctgccaccaagttcctcattgataatcccaag
gcaacgctgaatcaattgatgaagcatgtgccggcacctgattttccaaccggtggcgaa
attgttggcctggaaggtgttcgcgaagcctatgccaccggcaaaggctcttttaaggtg
cgcgcaaccaccgagatttctaaagtcacatctcgcaaaatgggaattgtgatcaaagaa
ctgccatttaatatcggccccgaaaaagttgtggaacgtattgcagaccttgccaaagcg
aagaagattcagggaatttcagacatcatcgacctcactgatggtcagaccggcaccaat
gttgtcattgaactcaagaatggttttgagccagaagatgttctagaaaagctcttcaag
ctcactccgatggaagatgcctttgccattaacgccgttgcgctggtcaagggcaagcca
caaacacttggcctaaaggaactgctgcaggtctttatcgatcaccgcatcgaagttgtg
cgccgccgctccgaatttcgaaaggcaaaggcggaagaccgactctcactcgttgatgga
cttctcaaagcaattatcgatatcgataaggtcatcaagattatccgcggtagcgatgat
gctccggctgctaaagaagcgttaatcaaaggtttcaaactcaacgatgaacaagccacc
tacattctagatatgccgctgcgccggctgaccaagatgagcaagctcgaacttgagacc
gaatcaaaagagctcaaagggataattgcagcccttgctacattgctcaagagtgaagaa
gcaatccgcaagcaggtttcggatgagctcaccgcggtaagcaaagcatttgccacaccg
cgacgtacccgaatcggcaaagagtaa
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