Candidatus Planktophila versatilis: A1sIA79_02465
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Entry
A1sIA79_02465 CDS
T05250
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1sIA79_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_02465
Enzymes [BR:
pvs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A1sIA79_02465
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A1sIA79_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ASY17935
LinkDB
All DBs
Position
complement(482969..483775)
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AA seq
268 aa
AA seq
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MAKRSIAYAELTGAEAIQVFTSNPRGWAMPETNHEADAIFREKAAALDLETYVHAPFLIN
LGSPTEGTYKNSLASTAYSLKRGQEIGALGVVVHTGSAVNEDFIDKAWKQINKGMMPILE
ALSDDAPYLLLEPTAGQGQSLVKRLEDLEYYLKALEYHPKVGICLDTCHVFAAGHDIAKK
GGMKETLDLLVEVAGIERIQLIHANDSMDVCGALKDRHQNIGEGFIGVDPFKELLHHPAV
ANAPLILETPGMEPEHGAEIALLKKLRG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgatctatcgcctatgccgaactcaccggtgctgaagctattcaagtcttc
acatctaatcctcgtggttgggcgatgccggaaacaaaccatgaagcagatgccatcttc
cgagaaaaagctgcggcacttgatctagaaacgtatgtgcatgcaccatttctgatcaat
ctaggttctcccaccgaaggcacctataagaattcattggcatcaactgcgtattccctc
aagcgcggccaggaaattggcgctctgggtgtggtcgttcataccggctctgccgtcaat
gaagactttattgataaagcgtggaagcagataaacaaaggcatgatgccaattcttgaa
gcgctctccgatgatgcgccatacctgctgctagaacccactgccggacaggggcaatcg
ctagtaaagcgcctggaagatcttgaatactatttaaaggcccttgaatatcatccaaag
gtcggcatttgtcttgacacctgccacgtctttgctgcaggccatgacattgcaaaaaag
ggtggcatgaaagaaacgttggatctcttagttgaagttgctggcatcgaacgtattcaa
cttattcacgccaatgactcaatggatgtgtgtggcgcgcttaaagatcgccaccaaaat
attggtgaaggatttatcggcgttgacccatttaaagaactcttacatcacccagctgtt
gctaacgctcccctgattcttgaaactccaggaatggagcccgagcacggtgctgaaatt
gcactgctaaagaagttgcgaggatga
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