Candidatus Planktophila versatilis: A1sIA79_02695
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Entry
A1sIA79_02695 CDS
T05250
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs03030
DNA replication
pvs03430
Mismatch repair
pvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1sIA79_02695
03430 Mismatch repair
A1sIA79_02695
03440 Homologous recombination
A1sIA79_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvs03032
]
A1sIA79_02695
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_02695
Enzymes [BR:
pvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1sIA79_02695
DNA replication proteins [BR:
pvs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1sIA79_02695
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1sIA79_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
ASY17144
UniProt:
A0ABN5BBF0
LinkDB
All DBs
Position
528633..532166
Genome browser
AA seq
1177 aa
AA seq
DB search
MSSEDFSASRASTKDSFVHLHVHTEYSMLDGAARVGDLVNEVARQEMPAIAMTDHGNVFG
AFDFYKQATKAGVKPIIGIEAYVAPESRFDKKRVQWADGGEDDVSGGGAYTHMTILAENN
QGLANLFKLSSLASLEGYYYKPRMDRELISRYADGLIATTGCPGGEIQTRLRMGNYKEAL
RAASDYRDIFGANNFFLEVMDHHIDVETRVKADLLKLGKELKLPLLATNDLHYTFHEDAA
AHEALLCVQSGSTLADPKRFKFENDEFYLKTPAQMRELFKEIPESCDNTLLIAERCNVKL
REDENLLPAFTVPQAETEDSWLRKEAERGLHERMKDKATPEHITRLHYELDVMIKMGFPG
YFLVVADLVAHAKKVGIRVGPGRGSAAGSLVAYALGITGLDPIEHGLLFERFLNPERISM
PDIDLDFDERRRSEMIRYATEKYGEDRVAQIITYGTIKSKQSLKDSTRVLGYPYAIGEKL
TKALPPSVMGKDITLSGVFDSKDARYGEAGEFRQLYETDPDSKRVVDLAKGLEGLKRQWG
VHAAGVILSREPLLDVIPIHRREADGAIITQFDMGACESTGLLKMDFLGLRNLSVLDDAL
LNINANQNIDVVLEDLPLHDKKTFELLSRGDTLGVFQLDGGPMRALLRSMAPDSFADISA
VIALYRPGPMGENAHNNYADRKNSRKPVEPIHPELNLPLQEILGDTYGLIVYQEQVMAIA
QKVAGFTLGRADLLRKAMGKKNKEILDKEYIPFEAGMKSNGFSEAAIQRLWEVLIPFSDY
AFNRAHSAGYGVVSFWTAYLKANYPTEYMAALLTSVRDDKDKSALYLSECRRMGIKVLPP
DVNESDAEYTPRGVDIRFGLAAIRNVGEGVVASVKAARATKGAFTSFGDFLAKVDANVCN
KKTIESLVKAGAFDSLGHPRKGLMAIHLEAIDSVIETKRAEAIGQFDLFGGDSISQLASM
DIEIPSTEWDKSTLLTFEREMLGLYVSDHPLLGVEHVLRSHTDMTISELLDESPADGVVT
IGGLITGIQRKVSRQGASWAVVNVEDLEGAIEVLFFSNTYNQYALSLTEDRVVVVKGRFS
RTDEQVRFTALEMKMPDISGAPTGPLLITLPATQVTPPIVERIKEILRSHPGKREVHLHV
VDQQKTTTLKIDALVTSSPSLSADLKAILGPECLVRI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgaagatttttcagcttcacgggcatcgacgaaagactcgtttgtacatcta
catgtacataccgagtactcgatgctcgatggtgccgcgcgcgtcggtgatctcgttaat
gaggtagctcgccaagaaatgccggctattgcaatgacagatcatggcaatgtatttggt
gcctttgatttctataagcaagcaactaaagcaggcgtcaaaccgattattggaattgaa
gcctacgttgcacctgaatcacgatttgataagaagcgcgttcagtgggctgatggcgga
gaagatgatgtctctggcggcggggcatatacgcatatgacgattttggctgagaacaat
caggggttagccaatctttttaagctctcttcccttgcctcactagaaggttattactac
aagccgcggatggatcgcgagctgatctccagatatgccgatggactgatagccacaacg
ggttgcccgggtggagaaatccaaacgcgtctgcgtatgggaaattacaaagaggcgcta
cgtgcggccagtgattatcgagatattttcggtgctaacaacttctttctagaagtaatg
gaccaccatattgatgttgaaactcgcgtcaaagctgacctacttaagctgggcaaagaa
cttaaattgccactgcttgcaacgaatgatcttcattacacattccatgaagatgccgca
gcccatgaagctctgctctgtgtgcaatctggttctaccctggctgatccaaagcgattc
aaatttgaaaatgatgagttctatctcaagaccccggcccagatgcgcgaactctttaaa
gagattccagagtcatgcgataacaccttgctcatcgctgagcgttgtaatgtgaaacta
cgcgaagatgagaacctcctgcctgcctttactgtgccgcaagcagagacggaagattct
tggctgcgcaaagaagcagaacgcggattgcatgaacgtatgaaagataaggcaacgccc
gaacacatcacacgtttacattacgaactcgatgtcatgatcaagatgggttttcctggt
tactttctcgtcgttgcagatcttgtggcacatgcaaagaaggtcggaattagagttggc
ccaggacgcggttcggccgcaggttcacttgtggcttatgcactaggcattactggtctt
gatccgattgagcacggacttttattcgagcgctttctgaatccagagcgaatctcaatg
cccgatattgatcttgacttcgatgaacgtcgccgctcagaaatgattcgctatgcaact
gaaaaatacggcgaagaccgtgttgctcagatcattacgtatggaactatcaaatcaaag
caatcacttaaagattcaacgcgcgttcttggatacccatatgccatcggtgaaaaactc
accaaggcacttccaccatcggtgatggggaaagacatcactctctctggagtattcgat
agtaaagatgctagatatggagaagcgggggagtttagacaactctatgaaacagatcct
gactccaagcgagtggtagatcttgctaaaggcctagaaggcctgaaacgacaatggggc
gtgcacgcagctggcgttattctctcgcgcgagcctttattagatgtgattccaattcat
cgccgcgaagcagacggtgccatcattactcaattcgatatgggagcttgtgaatctact
gggctgctcaaaatggatttcttgggacttcgcaacctttcggtattagatgacgcccta
cttaacattaatgcaaatcaaaatattgatgtagttcttgaagatttaccgctgcacgat
aagaagaccttcgaacttctctcacgtggtgacacattaggtgtattccaactcgacggt
ggcccgatgcgagcacttcttcgcagtatggcccctgattcctttgctgatatttcagct
gttatcgcactctatcgcccaggaccaatgggtgagaatgcgcataataactatgccgat
cgaaagaattcacggaaacctgttgaaccaattcatcctgagttaaatcttccgctgcag
gagattcttggtgatacctatggtctgattgtttatcaagagcaggtaatggccattgcg
caaaaggtggcgggctttaccttaggtcgcgcagatcttttgcgtaaggcgatgggtaag
aagaataaagagattctagataaggaatacattccatttgaagcaggaatgaaatccaac
ggattttccgaagctgcgattcaacggctatgggaagtgttgattcccttctctgactac
gcatttaaccgggcgcatagcgccggctatggtgtggtctcgttctggacggcctactta
aaggcaaattacccgactgaatatatggcagcgcttctcactagtgtgcgcgatgataaa
gataagtcagcgctctatctctcggaatgtcgccgtatgggcattaaagtcttgccgcca
gatgtcaatgaatctgatgccgaatacacaccacgtggtgtggatattcgttttggatta
gcggctatccgcaatgtcggagaaggtgttgtcgcctccgttaaagctgcccgggctaca
aagggcgcatttacttccttcggggacttcctggcaaaagttgatgccaatgtgtgtaat
aaaaagaccattgaatctttggttaaagccggagcatttgattccttaggccatccgcgt
aaggggttgatggctattcaccttgaagctatcgactctgtcattgaaacaaagcgcgcg
gaggcaattggacaatttgatttgttcggaggcgattcaatttcacaactagcaagtatg
gatatcgagattccatcgacggaatgggataagtccacgctacttacctttgaacgagag
atgctcggtctctatgtatctgatcacccactgctcggggtagagcatgtgctgcgttca
cacacggatatgaccattagcgaactactcgatgaaagtccggccgatggcgttgtgacc
atcggtggattaatcaccggcattcaacgaaaagtttctcgtcaaggtgcatcatgggca
gtggtaaacgttgaggatttagaaggagcaattgaagttctcttcttctccaatacatat
aaccaatatgcactctcactcaccgaagatcgtgttgtagttgttaaggggcgcttctcg
cgcactgatgaacaagtcagatttaccgccctggaaatgaagatgccagatatttccgga
gcaccaacagggccattacttatcaccttgccagcaacgcaagtcacacctccgattgtt
gagcgaattaaagagatcctgcgttctcatcctggaaagcgtgaagtccatctacacgtg
gttgatcagcagaagaccaccactcttaaaattgacgcgctagtaacatcatcgccaagt
ttgagcgccgacctcaaagcaatattggggccggaatgcctggtccggatttaa
DBGET
integrated database retrieval system
