Candidatus Planktophila versatilis: A1sIA79_03185
Help
Entry
A1sIA79_03185 CDS
T05250
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvs03019
]
A1sIA79_03185
Enzymes [BR:
pvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A1sIA79_03185
Messenger RNA biogenesis [BR:
pvs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A1sIA79_03185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
MTR4-like_stalk
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ASY17233
UniProt:
A0ABM6MEA3
LinkDB
All DBs
Position
complement(633776..636151)
Genome browser
AA seq
791 aa
AA seq
DB search
MTTPAEQYAAAKKRGTHPLTTQFIEQFDFGFDEFQIIACQAVEDGKGVLVAAPTGAGKTV
VGEFAAFSSLARGKKCFYTTPIKALSNQKFAEFQERFGEHRVGLLTGDTNINSEADILVM
TTEVLRNMLYANSSTLTNLGSVVMDEVHYLADKFRGAVWEEVLIHLMESVQVISLSATVS
NAEEFGEWLGEIRGATEVIVSEIRPIPLYQHVLIGDRMIDLFNEPGRINPEILGLEREAL
RRTKAPRGRRDRFNDSEGRLSRAEIIEKLQRENLLPAITFIFSRVGCDAAVKQCLNEGVK
LTTTEERIEIVATAQRYTQNLAEEDLEVLGYRDWLTALERGIAAHHAGMLPSFKGAVEDL
FKRGLVKAVFATETLALGINMPARTVVLEKLTKWNGEAHVSITPGEYTQLTGRAGRRGID
IEGNAVVQWSPTVDSATAAGLASTRTYPLRSSFTPTYNMSINLIARFGRERARGSLESSF
AQFQADRAVIGLVRQIRKNDSAAAEQDESAQCHLGNFTEYARTRIDIKELERLLSKRDGR
RTFDQRQRVKMENELDSMRRALRAHPCHSCNDRETHARFAERADRLNRESEGLRSRVENR
THVIAKTFDRICNVLTHLGYIEGEKPLAQGKILAKIYAESDLLLTESIRRGVFENLTPVE
LLSVASAMIYESRSVENYAPKMPHQNVANALAVVAKIWVELEDIENEFDVKTQREPDFGF
CYAAYRWANGHSLSSVIKGTDMTVGDFVRCIKQLIDLLTQIGGAAENLRPICKEGVKRLD
RGVVSYMLGEL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccggcggagcaatacgcagccgccaagaagcgagggactcacccgctcaca
actcaattcattgaacagtttgatttcggttttgatgaatttcagattatcgcttgtcag
gccgttgaagatggcaagggcgtactcgtggcagcgccaaccggagccggcaagacggta
gtgggagagtttgcagcctttagttcactggctcgcggaaagaaatgtttttacacaaca
cccataaaagctctttcgaaccagaagtttgctgagtttcaagagcgtttcggtgaacac
cgcgtgggtcttctgaccggtgatacaaacatcaactcagaagctgacatcttggtgatg
accactgaagtcctgcgaaacatgctttatgcgaattcatcgacgctcaccaatcttgga
tcggtagtgatggatgaggtgcattatttagccgataagttccgtggagcggtgtgggaa
gaagttcttattcacctcatggagagcgtgcaggtgatctcactttccgccaccgtctcc
aatgctgaagaatttggtgagtggctcggtgagatacgtggcgccaccgaggtgatagtc
agtgaaatcagacccatcccgctctatcaacatgtacttattggcgatcggatgattgat
ctctttaacgaaccaggaagaatcaatcctgagattttaggtcttgagcgcgaagcgcta
cgacgtaccaaagcacccaggggtcggcgcgatagattcaacgatagtgagggtcgatta
tcacgtgctgaaattatcgagaagcttcagcgagagaacttattgcctgcaattaccttc
atcttctcccgggttggctgtgatgctgcggtcaagcagtgtctgaatgagggagtgaag
ttaacaactactgaagagcggatagaaattgttgcaaccgcccagcgttacacgcagaac
ttagccgaagaggatttagaagttttgggttatcgcgattggctcaccgcactcgaacgt
ggaatcgctgcccaccatgcaggtatgttgccgagttttaagggcgcggtagaagatctc
tttaagcgtggtctggtcaaggcggtctttgctactgaaaccttggcacttggaattaat
atgccagcgcgcacagttgtgttggaaaagctcacgaagtggaatggtgaggcacacgtc
tcgattacaccaggggagtacacccagctcactggtcgcgcaggtcgacgaggaattgat
attgaaggtaacgcagttgtgcagtggtcaccaactgtagattctgctaccgcagcgggg
ctagcatcaactcgaacatatccacttcgttcttcctttactcccacatacaacatgtca
ataaatctcatcgcccgttttggaagagaacgtgcgcgaggaagtctcgagtcatccttt
gcccagttccaagcagaccgagcagttattggattagtcagacagattcgaaagaatgat
tccgctgcagcagaacaagatgagtctgcccaatgccatctcgggaatttcaccgaatat
gcccgcactcgaatcgacattaaagagcttgagcgattgctcagcaagcgagatggtcgg
cgcacctttgatcaacgtcagagagtaaagatggagaacgaacttgattccatgcggcgt
gctcttcgtgcccatccctgccactcctgtaacgatcgagaaacacacgctcgatttgct
gaacgcgccgatagattgaacagggaatctgaaggtttacgttctcgcgtggaaaatcgc
acgcatgtgattgcaaagacattcgaccgaatctgtaatgtgctgacccatcttggctat
atcgagggtgaaaagccgctagcgcaaggcaagattctggcgaagatttatgctgagtca
gatttgcttcttaccgagtcaattcgtcggggagtctttgaaaatctgactccggtcgaa
ctcttatcggttgcctccgcgatgatctatgagagtcgaagtgttgaaaactatgccccg
aagatgccacaccaaaatgtagccaacgccctggcggttgtcgccaagatttgggtggaa
cttgaagatattgaaaatgagtttgatgtgaaaactcaacgtgagcccgattttggtttc
tgttatgccgcttatcgttgggcaaatggacactcactgagcagtgttatcaaaggcacg
gatatgacggttggtgatttcgtgcgatgcatcaagcagttaattgacttgcttactcag
attggtggcgcagcagagaatcttcgtccgatatgtaaagagggtgtcaaacgattagat
cgcggtgttgtttcctatatgttgggtgagctatga
DBGET
integrated database retrieval system
