Candidatus Planktophila versatilis: A1sIA79_03340
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Entry
A1sIA79_03340 CDS
T05250
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1sIA79_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_03340
Enzymes [BR:
pvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1sIA79_03340
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A1sIA79_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ASY17262
LinkDB
All DBs
Position
complement(663486..665357)
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AA seq
623 aa
AA seq
DB search
MALTRPLRLKREVVRLAPEISTTDNPVARVWVDSGVFHLDQSYDYLVPDNLSEQVAVGVR
VQVPFNGRECEALVLERITISSGRRLKSITKVISRVPVASKPSLDLIALVAHRWACHPYD
VIRSAIPPRVASVEKMHWIDKTTDRPGQSSVRQYLQLPAYQDPFQALARHVKSVRSRGSI
LVIVPDSRSVLRLSKHFPEALILDSDLPRSERYENFLRARTTSAQIIIGTRSAIFADSPD
LASIVIFNESSEQFFEVRSPGWNARDIAILRARNENVAIYCVGYSPSAEVARLIDIGWFE
FKGAKQKIRVDTFQQEFSELLPGKIIGELRRLVKQGPILFIAPRKGYSQSISCSGCRNIS
TCSCGGRLEKKGATTAISCSLCANVYSEWVCQYCAGLKPFLLNRGSERFAQEIGVALPGI
PITLCEAEKMVDDFELNSGIVIATPGSAPMSADGYAAVVILDGEKLLNQSDLRAQERARE
IFFTHAALLNSSGSALLVINHSNPIVGALASWKPSLISRRELQERIEASLPPFVRSISLD
IDSAESATLVRALNKSRDEGRLPASTRILGPSTLNTSTHRILLLAPLEDGEALVLLMHEF
QRRRSATRKKLATLRIDPYSLSR
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtggcacttacgaggccactacgtcttaagcgcgaagtagttcgccttgcgccagagatc
agcacaactgataatcctgtggcgcgcgtctgggtagacagtggggtctttcatctagat
caaagctatgactatctagttcccgataatctatccgagcaggttgccgtgggcgttcgg
gttcaggtgccattcaatggcagagagtgtgaagcactcgttctagaacgcataaccata
tcttcgggtcgaaggcttaagagcattactaaggtgatttcccgcgttccggttgcttca
aaaccttccttagatttgattgcactagttgcgcacagatgggcatgtcatccttatgac
gtaattcgttctgcaatccctcctcgtgtcgcaagtgtcgagaagatgcactggattgat
aagactactgatagaccgggtcaatcatcggtacgtcagtaccttcaactacccgcatac
caagatccttttcaggccctagcaaggcacgtcaaaagcgtccggagcagaggttcaatc
ctggtgatagttccagatagtagatcagtgcttcgattaagcaagcattttccagaggcg
ctgattctggattcagatctgccgcgaagtgagagatatgagaattttctgcgtgccaga
acaacatcggctcagatcattatcggaaccagaagcgccatttttgccgatagtccagat
ttagcgtcaatcgtcatttttaatgaatcatcggagcaattcttcgaagttcgatcaccg
gggtggaacgcacgtgacatcgcaattcttcgcgcacgaaatgagaatgttgctatctac
tgcgtgggttatagtcccagtgccgaagtcgctcggcttatcgatatcggctggtttgaa
ttcaaaggcgctaaacaaaagattcgagttgatacttttcagcaggaattttccgagctg
cttccgggcaaaatcattggcgagctccgccgcttggtcaaacagggaccgattctcttc
atcgcacccagaaagggatattcgcagtcgattagttgtagtggatgtcgaaatatctct
acgtgttcatgtggtggtcggctagagaagaagggtgccacgacggctatctcttgttcc
ttgtgtgcaaatgtctattccgagtgggtctgtcagtattgtgccgggcttaagccgttt
cttctcaatcgtggcagcgagcgatttgcacaagaaatcggagtagccctaccaggtatt
ccaatcacactgtgtgaggccgagaagatggttgatgattttgaactgaattctggaatt
gtcattgccactccgggatcagctcccatgtcggccgatgggtatgccgctgtcgtaatt
ctcgacggtgaaaaattgcttaatcaatcagatctcagagcgcaggagcgagctcgagaa
atattctttacccacgctgcgctattgaactcttcgggatctgcattgctagttatcaat
cactcaaatcccatagtgggcgcccttgcttcctggaaaccatctctaatttcccggcga
gagttgcaagagcgcatcgaagcctcattgcctccgttcgtcaggtctatctcacttgat
attgatagtgctgaatcggcaaccttggtcagagcattaaataaatcgcgcgatgagggc
aggcttccggcgtccacgagaattcttggaccatcaactctgaacacctctacacatcgg
attctcttacttgctccacttgaggacggtgaggcgctagttctactgatgcatgagttc
caacgaagacgaagtgcaacaaggaagaagttggcaacgctgcggattgatccatattcg
ctctcgcgatag
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