Candidatus Planktophila versatilis: A1sIA79_04345
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Entry
A1sIA79_04345 CDS
T05250
Name
(GenBank) spermidine/putrescine transport system substrate-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
A1sIA79_04345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvs02000
]
A1sIA79_04345
Transporters [BR:
pvs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
A1sIA79_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
PRD1_P5_spike_N
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ASY17957
UniProt:
A0ABM6MGD0
LinkDB
All DBs
Position
complement(857079..858245)
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AA seq
388 aa
AA seq
DB search
MAKKPLSPEARSIINSKVSRRAVLAGAGAVAGASALAACGSGGGSSENAIRWGNWPLYLD
VDDSGKNYPTLQAFIKDSGIDVKYLEDYNDNDEFFGKVQAQLKLNKDIGYDLVCPTDWMA
GRWIRLGYAQKFDSANIPNKSNIVDTLAAPSYDANRDYSLTWQGIMGGFGWNTTKNPKGI
RTLDDLFSPANKGKIVVLSEMRDTIGIILMAQGVNLQTVTEAQFMNGVDFLAQKIADGWI
RGVKGNEYAEDLTSGDATAVIGWSGDMFILKSENEGKFDFAIPESGGTISGDNMLIPSTA
TPEAKANAEKLINYYYEPAVAAEVAAYVNYFCPVKGAQAEMEKIDPDLAASEFIFPTAKT
MSNLSVFRALTPTEETTWTEAFQKAAGN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaccgctctctccagaagcacgttcaatcattaattctaaagtttcgcgt
cgcgccgttttagctggcgctggcgcagtagctggtgcaagtgcgctcgctgcatgtggt
tccggtggtggatcttctgagaacgccattcgttggggcaactggccgctctaccttgat
gttgatgactcaggtaagaattatccaacgctgcaggcattcattaaggacagtggcatt
gatgttaagtatttggaagattacaacgataatgatgagttctttggaaaagttcaagct
cagcttaagttgaataaagatattggctatgacctagtctgcccaacagattggatggct
ggccgctggattcgtctgggctatgcgcagaaatttgattccgcaaatattccaaataag
agcaatatcgtcgacacacttgccgcaccttcttatgatgcaaaccgcgattactcactg
acctggcaaggcatcatgggcggttttggttggaacaccaccaagaatccaaagggcatt
cgcacactcgatgatctcttctccccagctaataagggaaagattgtggttctctctgaa
atgcgtgacaccatcggaattatcttgatggcccaaggtgtcaacctacagacagtgacc
gaagcacagtttatgaatggcgttgacttcctagcgcagaagattgccgatggttggatt
cgcggagttaagggcaacgaatacgcagaggatctcacctctggtgatgccactgcagtc
attggttggtctggcgatatgtttattctaaagtcagaaaatgaaggaaagtttgacttt
gccatcccagagtcaggcggaactatctctggcgataatatgttgattccatcaactgca
acccctgaggcaaaggccaatgcggagaagctcattaattactattacgagccagcagtt
gccgcagaagttgccgcatatgtgaattacttctgtccggtcaagggcgcccaagctgag
atggagaagattgatcctgatctagcagcaagtgagttcatcttcccaactgctaagacc
atgtccaacctctcggtattccgtgctctgacaccaacggaagagacaacctggactgaa
gctttccagaaggctgccggaaactaa
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