Candidatus Planktophila versatilis: A1sIA79_04500
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Entry
A1sIA79_04500 CDS
T05250
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs00550
Peptidoglycan biosynthesis
pvs01100
Metabolic pathways
pvs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A1sIA79_04500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A1sIA79_04500
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
A1sIA79_04500
Enzymes [BR:
pvs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A1sIA79_04500
Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
A1sIA79_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ASY17477
LinkDB
All DBs
Position
complement(890474..892609)
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AA seq
711 aa
AA seq
DB search
MNQRSRLSLLVIQIFFVSLMVALLGRLFYLQVAAGPTYRDAALSIQSRDVATPANRGFIV
DSSGVPLALSKVALAITVDRTVIDKLPDEGVAVLRKLVKLLGLQYSDVWQRTRLCGELPK
GVRAGCWTGSRFQPIPITKSADPALALRIVERSDRYPGISATPVAIRSYPQTLGVTGSHV
LGYVGPLTEADLAGANGRTYFRSEFIGKTGLEIEYDEYLRGVPGIKTFIVDRKEAVTNTS
QDTKPIAGNHLVTSLDVRLQAASEKALEGAVKRARSMGYRADGGAAVVLDVRNGQVLALA
SYPSFDPNAFERGLTIKEAQALYSEDNGVPALNRALQGLYAPASTFKAVSVVASKAAGYD
LNKSYSCPSEVQVGTRAFQNFESKAQGTISMKKAIAISCDTIWYQIAYDEWVRDGGLRPK
SNPNDHFFNAAKGFQVGVRTGVDLPSESAGRLADREYKKTWYEQNKAFYCNYRDRATKAQ
QTPFLLQLAQENCVDGDKIRGGDAVNFSIGQGDTVITPIKLAQMYAAIANGGTIWQPTIA
KAVVSQQGEVIQTFEPIELGDISADSQTIAFLHDALQEVTLSGTSAGIFSRFPVPTAGKT
GTAQVFGRNSNGTQKADTSWYASFAPAKKPRYAVVMMVSQGGFGASTSGVGVREIYETLF
GVQGNIVKPELALFPKGKPPIKLPRISPAKKPAASILNPEKAKKEIAVTKP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacgctcacgcttaagtttgttagtgattcaaatattttttgtctctctcatg
gtcgcactccttggccgtctcttttatcttcaagttgcagcaggtccgacctatcgcgat
gccgcattgagtattcaaagccgcgatgttgcaactccggcaaaccgtggatttatagtt
gattcttccggcgttccgctggcgctgagcaaggttgccctcgctattactgttgatcgc
accgtgattgataagttgcctgatgagggcgtagcagtgctacgaaagctcgttaagttg
ttaggacttcaatactctgatgtgtggcagcgcacgcgcctctgcggtgagttacccaag
ggagtgcgtgctggttgctggacaggttcacgtttccaacctatccctattaccaaatct
gctgatccagcacttgcgttgcgcattgttgaaagatcagatcgttatcctggaatttct
gccacacctgttgccattagaagttacccgcaaacactgggtgtcaccggtagtcatgtg
ctgggttatgtcgggccactgacagaggcagatcttgctggtgctaatgggcgcacctac
ttccgttctgaatttattggtaagaccgggcttgaaatcgaatacgatgaatatctacgt
ggtgttcctggaataaaaacttttatcgttgaccgcaaagaagcggtgacgaatacgagt
caggatacgaagccgattgccggcaatcacttggtgacaagtttagatgtcagacttcaa
gctgccagtgaaaaagcgctggagggagcagtaaagcgtgcacgttcgatgggatatcga
gcagatggtggagccgcagtcgttcttgatgttcgaaacggtcaagttcttgcgctagct
tcttatccatcttttgatcccaatgcctttgaacgtggactgacaatcaaagaagcacag
gcgctttatagcgaagacaatggtgtaccagcactgaaccgggcgctacagggactctat
gctccggcctctacctttaaagcagtttcggtagtagcatcaaaagctgcgggatatgac
ttgaataagagttattcgtgtccatcggaagtgcaagtgggaactcgtgcttttcaaaac
ttcgaaagtaaggcccaaggaacgatttcgatgaagaaggcaatcgcaatttcgtgtgac
actatctggtatcaaattgcatacgatgagtgggtgcgagatggtggtttacggcctaaa
tcaaacccgaatgaccacttctttaacgctgccaagggctttcaggtgggggtaagaaca
ggtgtagatctaccttctgaatcagctggaagacttgctgaccgcgagtataagaagact
tggtatgaacagaataaagctttttactgtaactacagagatcgcgcaacaaaggcgcag
caaacgccatttctgcttcagctagcgcaagaaaattgcgtagacggagataaaatccgt
ggtggtgatgcggtgaacttctctatcggtcaaggcgatactgtgattacacccattaag
ttagctcaaatgtatgcagcgatagctaacggcggaacaatctggcaacccaccatcgcc
aaagctgtggtgagtcagcaaggagaggtaatccaaacatttgaaccaatagagttgggc
gacatctcagccgattcgcaaaccatcgctttcttgcatgatgcactccaagaggtcacc
ctgtctggaacctcggccggaatcttttcacgttttccagtgccaacagcaggtaagact
ggaactgcgcaagtatttggtaggaactcaaatggaacacagaaagctgatacctcttgg
tatgcctcttttgcaccagcgaagaaaccacgctacgcagttgtcatgatggtcagccaa
ggtggttttggagccagtacatcaggtgtgggtgtgcgagaaatttatgagactctcttc
ggcgtacaaggcaatattgttaaacctgaactagcgttatttcctaaaggaaaaccaccg
attaagttgcctcgtatctcaccggccaagaaaccggctgcatctatattgaacccagaa
aaagcgaagaaggagattgcggtgaccaagccatga
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