Candidatus Planktophila versatilis: A1sIA79_05015
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Entry
A1sIA79_05015 CDS
T05250
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
A1sIA79_05015
Enzymes [BR:
pvs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
A1sIA79_05015
Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
A1sIA79_05015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
ASY17967
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All DBs
Position
complement(983421..984614)
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AA seq
397 aa
AA seq
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MMRTFKALLLVFSISFAATSTATATAPLQFSFTGSGYGHGVGMSQIGAKARALSGESATA
ILNYYYKNVQIAPIVDTQTIRVNIGRALKSISFVSATPDSAVQIFSGDIASAQDALPALT
LSAKKKITFNVDGAFATGEGLRAKAFTIRWSGPSSVITFSQPGSVVKYRYGQIQVKVVKS
AMEVTNTLALRDEYLWGISEVPSSWPAAALEAQVIASRSYALSKLGKINSACDCQVYSHI
ADQNFVGFSKESEPRFGQFWKAAVSRTIIDTSTSLAILSNGKPIQAYFFSSSGGATQTTL
DAWGQATSYTQSVVDPAGLDPKNNPRFATWSASADQSLVATAFLLADIVTLEIISRNTAG
AVTYIKGTASDGSTKLLRGDTFRSRVKIPSPYFNLAG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaggacgtttaaagccttactcttagttttctccatctcatttgctgcaacatcg
accgctacagcaaccgcacctctccaattttcttttacgggttccggatacggccacggc
gttggaatgagtcagattggagccaaggctcgtgctctctcaggtgaaagtgccacggca
attcttaattactattacaaaaatgtgcagattgcgccgatagtagatacccaaacgatt
cgagtaaatattggtcgcgctctaaagtcaatttcatttgtcagcgctacaccagattca
gcagtgcagatctttagcggtgacattgcaagtgcacaagatgctctacccgcactgacc
ttaagtgccaagaagaagataactttcaacgttgatggtgcattcgctacgggtgaaggc
ctgcgcgccaaagccttcaccattaggtggagtggaccttcgtcagtcattacattttca
cagccaggtagtgtcgtgaaatacaggtatgggcagattcaagtgaaggtagtaaaaagc
gcaatggaggtcactaacacactggcccttcgcgatgagtacttatgggggattagcgaa
gttccgtcatcttggcctgcagctgcacttgaagcacaggtaattgcttcgcgttcttac
gctctttcaaagcttggaaaaattaactctgcatgcgactgtcaggtttattcacatatt
gcagatcagaactttgtgggcttttctaaagaatctgaaccgaggttcggtcagttctgg
aaagcggcagtttcgcgaacaatcattgacacttccacaagtctggcaattctaagtaat
ggaaaaccaatacaggcttacttcttctcatcctcaggtggcgcaacgcagacaaccctc
gatgcctgggggcaggcaacgagttatacgcaatcagtagttgatcctgcggggctagat
cctaaaaacaatcctcgctttgctacctggagcgcatcggcagatcaatctctagttgcc
actgccttcctgctcgcagacatcgtcactcttgaaataatctcccgaaatactgcaggg
gcagttacctacatcaagggcacagcaagtgatgggtcaaccaaattattgaggggcgat
acttttagaagtagagtaaagattccttcgccctactttaatttagcgggttaa
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