Candidatus Planktophila versatilis: A1sIA79_05210
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Entry
A1sIA79_05210 CDS
T05250
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs03420
Nucleotide excision repair
pvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1sIA79_05210
03430 Mismatch repair
A1sIA79_05210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_05210
Enzymes [BR:
pvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1sIA79_05210
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1sIA79_05210
MMR (mismatch excision repair)
Other MMR factors
A1sIA79_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASY17601
LinkDB
All DBs
Position
complement(1023861..1026104)
Genome browser
AA seq
747 aa
AA seq
DB search
MSATDPLLDGLNPQQQKAVSHAGPPLLVVAGAGSGKTRVLTRRIAYIMARRDVRPYEILA
ITFTNKAAGEMKERVTELVGPVAKSMWVSTFHSSCVRMLRQEVERLGYSSTFSIYDSADS
QKLISRVMETLNLDSKRYPVRQFQNLISNAKNELQTPYEYLSLASNQFETIVADVYTLYE
KRLQQANAMDFDDLIMKTVQVLQKFPEAKARFRSRFRHILIDEYQDTNHAQYQLVKELTG
VEGDGFPLAELCVVGDADQSIYGFRGATIRNILQFEVDYPNATTVLLEQNYRSTQNILSA
ANAVITKNESRKEKNLWSDAGAGAPLTGYVAESEYDEAEFIKGEIRSLQDMGHSNPGDTA
IFYRTNAQSRIFEEVFMRAAIPYKVVGGLRFYERKEVKDLLAYLRVLANPDDEVSLRRVI
NFPKRGIGDRALEEVELFAELHGISFWNALLRVTEATAVPNKAAHSISSFTSMLTALQTL
VEAKTKPSVIIEAVLEQSGLLTELEASTDPQDEVRVENLKELVSASMDYEERPFEELIED
EEISLSGFLEKVSLVADADEIPDGADHGGVVTLMTLHTAKGLEFPTVFLTGMEDGIFPHA
RTLDDPKEIEEERRLAYVGLTRAEKRLYISRAEYRLTFGTPKYNPASRFLDEIPAELIQW
NSEARSSITSSSSVKKSRLPSGPPPRATGKKSTAMALVVGQRVSHDTFGLGTVVSLAGEG
DKSEATINFGAYGDKRLLLRYAPVTAL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccgacccattgctagacggactcaatccgcagcaacagaaggcggtttcc
catgccggaccaccgctgctggttgtggcaggtgctggttctggaaagacgcgggtactt
acacgccgaattgcatacattatggctagacgcgatgtgcgcccctatgaaatcttggcg
attacatttaccaataaggctgccggtgagatgaaagagcgggtcactgaacttgttggc
cctgttgcaaagtcaatgtgggtctctacattccactcatcgtgtgtgcgcatgttgcgc
caagaggtggaacgacttggctacagcagcacctttagtatttatgactctgccgattct
cagaagctcatttcacgagtcatggagacgctcaaccttgattccaagcgctatccagtg
cgccaattccagaatttgatttctaatgcaaagaatgaattacagactccttatgaatac
ttaagtctggctagcaatcaattcgaaaccatcgttgctgatgtctataccctctatgaa
aagcggctacagcaggctaacgccatggatttcgatgacttaatcatgaagactgttcag
gtattgcagaaattccctgaagccaaagctcgctttcgttctcgctttcgccatatttta
attgatgagtaccaagatacaaatcatgcccagtatcaattggttaaggaacttaccggc
gttgaaggagacggcttcccactggcagagctctgtgttgttggagacgccgaccaatct
atctatggctttcgtggggcaacaattcgaaatattctgcaatttgaagttgattaccca
aacgcaactacggtcttacttgaacagaattaccgctccacccagaatattctcagcgcc
gcgaatgcggtcatcactaagaatgaatctcgcaaagagaagaatctgtggtctgatgct
ggtgcaggtgcgccactgactggatacgttgcggaatctgagtatgacgaagctgaattc
attaagggcgagattcgctcactgcaggatatgggccactcaaacccgggcgataccgcc
atcttctatcgcacaaatgcccaatctcgtatcttcgaagaagtgtttatgcgcgcagca
attccatataaagtcgttggtgggttgcgattctatgagcgcaaagaggtaaaggatcta
ttggcataccttcgggtgctggccaatcctgatgatgaagtttcactgcgtcgagttatt
aactttcctaagcggggtattggagatcgcgccctggaagaagttgagttgttcgccgaa
ttacacggcatttcattctggaacgcgcttttgcgagtaacagaggcaacagcggtgcca
aataaagctgcccactccattagttccttcacctccatgctcacagctctgcaaactctg
gtggaagcaaagacaaaaccttccgtgattattgaagcagtccttgagcaatctgggttg
cttactgaacttgaggcaagtacagatccgcaagatgaagtgcgagtggagaacctgaaa
gaacttgtttcagcctcgatggattatgaagagcgcccatttgaagagctcattgaagat
gaagagatttcactttcaggattcctggagaaagtttcacttgtggccgatgccgatgaa
attccagatggagccgatcatgggggagttgtcaccctcatgactctgcacaccgctaaa
ggtttggaatttccaacggtctttctcaccgggatggaagatggaatatttcctcatgcc
cgcaccctcgatgatccgaaagagattgaagaagagcgcagacttgcctatgtgggtctt
actagggcggagaaacgtctctacatttctcgcgctgaatatcgcttaacttttggaaca
cctaaatacaatccggcatcacgattcctcgatgagattcctgctgaacttattcaatgg
aatagcgaagctcgttcatctattacatcctcatccagtgtgaagaaatctcgacttcca
tcagggccaccgccacgagccacgggaaagaaatcaacagcgatggctcttgtcgtggga
cagcgtgtgtcacatgacacattcggacttggcaccgtcgtttcacttgctggcgagggc
gataaatcagaggcgaccattaacttcggcgcctacggtgataaacgcctgctgcttcga
tatgcccctgtcacagcgctataa
DBGET
integrated database retrieval system
