| Entry |
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| Name |
(GenBank) DNA excision repair protein ERCC-3
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| KO |
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| Organism |
pvs Candidatus Planktophila versatilis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pvs00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A1sIA79_05940
09124 Replication and repair
03420 Nucleotide excision repair
A1sIA79_05940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvs03021]
A1sIA79_05940
03400 DNA repair and recombination proteins [BR:pvs03400]
A1sIA79_05940
Enzymes [BR:pvs01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1sIA79_05940
Transcription machinery [BR:pvs03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A1sIA79_05940
DNA repair and recombination proteins [BR:pvs03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A1sIA79_05940
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1151959..1153608
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| AA seq |
549 aa
MSDGPLIVQSDKTLLLDVDHILSTECRRAIAPFAELERSPEHIHTYRLTNLGLWNARAAG
HDAELVIDTLIKFSRYAVPHSLLVDVAETMSRYGRLRLEADPVHGLILATTDVGVLEEVI
RAKKIAPLLGIRIDNETIAVHPSQRGQIKQSLLRLGWPAEDFAGYVDGQAHEIALKQDGW
KIRQYQEHAAEGFWHGGSGVVVLPCGAGKTIVGAAAMAHAKATTLILVTNTIAARQWRSE
LLKRTTLNDDEIGEYSGSKKEIRPVTIATYQVMTKKKNGVYAHLDLFDTHDWGLIIYDEV
HLLPAPIFRFTADIQSRRRLGLTATLVREDGMEGEVFSLIGPKRFDVPWKEIEAQGYIAP
AECIEVRVNLTEAERLAYATAEPEERYRYCATTRTKRNVVEEIVAHHANEQILVIGQYLD
QLDDLSETLGVPVIKGETPQKERERLFAAFRTGEITCLVVSKVANFSIDLPEATIAIQVS
GAFGSRQEEAQRLGRILRPKADGRGAIFYSVVSRDTIDQDFAQNRQRFLAEQGYSYRIID
ADDIFQGKF |
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| NT seq |
1650 nt +upstreamnt +downstreamnt
atgagcgatggcccattaatcgtccagagcgataaaacacttcttcttgatgttgaccac
atactttccactgaatgcagacgcgcaattgcaccctttgcagagctagagcgctcccct
gaacatattcatacctaccgcttaaccaatcttggactctggaatgcacgcgctgctgga
cacgatgcagagctagtaattgatactctgattaagttttcgcgctatgcggttcctcat
tcactacttgttgatgttgccgaaacgatgtctcgatatggtcgcctgcgactagaagct
gaccctgttcatggacttatccttgccaccactgacgttggagtgctggaagaagtaatc
cgtgcgaagaagatcgctccgctacttggtataagaattgataatgaaacaattgcagtg
caccccagccaacgcggtcagattaagcaatcacttcttcgccttggctggccagccgaa
gattttgcaggttatgtcgatggccaagcacatgagattgcgctcaagcaagatggctgg
aagattcgccaataccaagagcatgccgctgaaggattttggcatggtggttcaggtgtt
gtagttcttccgtgtggagctggaaagacaattgtgggcgctgccgcgatggcgcatgcg
aaagctacgactctcattcttgtcaccaacaccattgccgcccgtcaatggcgttctgaa
ttacttaagcgcacaacccttaatgatgacgagatcggtgaatactctggctcaaagaaa
gagattcgcccggtaacaattgccacataccaagtgatgacaaagaagaagaatggcgtc
tatgcccaccttgatctctttgatactcacgactgggggctgatcatctatgacgaagtg
catctattacctgcgccaatctttcgtttcacagccgatattcaatctcgcagacggtta
ggcctaactgcaactcttgtccgggaagatggcatggagggtgaagtcttctcactcatc
ggtcctaagcgttttgatgttccttggaaagagattgaagcgcagggatatatcgcacca
gctgaatgtattgaggtgcgagtaaatctcaccgaagccgagcgccttgcctatgcaact
gctgagccagaagaacgttaccgatattgcgcaactactcgaaccaagcgaaatgttgtc
gaagagattgtggctcaccatgccaatgagcagattcttgttattggtcagtatctagat
caactcgatgatttatcagaaactcttggagttccggtgattaaaggtgagacgccgcag
aaagaacgggaacgattatttgcagcatttcgcaccggtgaaattacctgtcttgttgtc
tcaaaggttgcaaacttttctattgatctaccagaggcaacaattgctattcaggtttcc
ggagcctttggttctcgccaagaagaggcgcaacgtttagggcgaattttgcgacctaag
gcagatggtcgtggggcaatattttattcggtggtttcacgagacactattgatcaagac
tttgctcaaaaccgccaacgtttcttagcggagcaaggttattcataccgaattattgat
gctgacgatatttttcaaggcaagttctaa |
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