Candidatus Planktophila versatilis: A1sIA79_05970
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Entry
A1sIA79_05970 CDS
T05250
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
pvs
Candidatus Planktophila versatilis
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_05970
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A1sIA79_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA
DnaB_C
AAA_22
Lon_C
AAA_16
AAA_30
nSTAND3
NTPase_1
TIP49
RecA
AAA_14
ABC_tran
NACHT
TniB
AAA_24
DUF7125
AAA_5
IstB_IS21
AAA_29
MCM
RsgA_GTPase
SLFN-g3_helicase
DAP3
Motif
Other DBs
NCBI-ProteinID:
ASY17737
LinkDB
All DBs
Position
1159108..1160475
Genome browser
AA seq
455 aa
AA seq
DB search
MAKVEKDPFRCFECGWSSQKWVGRCGECQAWGTVEELAAPKKLSLVAGSVTNKATAIGDV
DLSAAHARPTGVSELDRVLGGGLVPGAAILLAGEPGVGKSTLLLSVAAQSAAKGIPALYI
SGEESASQVRLRAERINAIDPQLFLASETDLGAVIAHIDAVKPELLIIDSVQTIGSSTAD
GSPGGVTQVREVAGALIRICKDRDITLLLVGHVTKDGSIAGPRLLEHIVDVVLQFEGERH
SRLRLIRAIKNRFGASDEVGCFDLSDTGIESVLDPTGLFTCRHTEPVPGTCVTVTLEGRR
PLLAEIQALVSAGRENDFGNARRVTSGLDAARTSMTLAVLELRAHVRVGGRDVYAATVGG
MKMSEPAADLALALAVASAAKGLALPADLVAIGEVGLAGEIRKVSGVSRRLAEAYRLGFK
RALVPAGSDVKIDGMEIVEVSRLDQALARVKITGD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagttgagaaggacccatttcgctgttttgaatgcggttggagttcacagaag
tgggttggtcgctgcggagaatgccaggcgtggggcacagttgaagaacttgctgcacca
aagaagctctctctcgttgcaggttcggtaacaaataaagcaacagctattggcgatgtc
gacctatctgccgcgcacgcaagaccaaccggagtatcagagttagatcgagttctcggt
ggcggacttgtaccgggtgcagccatattgcttgccggtgaaccaggtgttggcaaatca
actctcctgctttccgtagccgcccaaagtgcggcaaaaggaattccggcgctctatatt
tccggtgaagaatctgcatcccaagttcgcttacgtgcagagcgcatcaacgcgattgac
ccacaattatttctggcgtccgaaacagatttaggtgccgtcattgcacatatcgatgca
gtcaagcctgaattactcatcatcgactcggttcaaactatcggttcatcaactgccgat
ggctcaccgggtggggtaacacaggtgcgagaagtagcaggggcgctcattcgcatctgc
aaagatcgagatatcactctgctattagttggccatgtgacaaaagatggttctattgct
ggtccgcgtttacttgaacatatcgtcgatgtagttcttcaattcgaaggcgagcgtcat
tcacgacttcgccttattcgtgcaattaagaatcgttttggcgctagcgatgaagttggt
tgttttgatctcagtgataccggaatagagagcgtgctagaccccacggggctatttaca
tgtcgtcacaccgaaccagtacctggaacgtgtgtcaccgtaaccctcgagggtcgtcgc
ccacttcttgccgagattcaagcactagtaagtgctgggcgtgagaatgattttggaaat
gcacggcgggtaacaagtggactcgatgcagcccgcacctcaatgacacttgcagttctt
gagttacgtgcccacgttcgagtaggtggacgcgatgtttatgcggcaactgttggcggt
atgaagatgtccgaacctgccgccgatttagctctcgcacttgcagttgcttcagctgct
aaaggcttagcactgcccgctgatctggttgccattggcgaagtggggctggcgggtgag
attcgtaaagtaagcggtgtttctcgcagattagccgaggcatatcgcctaggtttcaaa
cgcgctttggttccagctggctctgatgtgaagattgatggaatggagattgtcgaagtt
tctcgtcttgatcaagctctggcgcgcgtaaaaatcactggtgattaa
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