Pogona vitticeps (central bearded dragon): 110070449
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Entry
110070449 CDS
T05000
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt00100
Steroid biosynthesis
pvt01100
Metabolic pathways
Module
pvt_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110070449 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvt01006
]
110070449 (FDFT1)
Enzymes [BR:
pvt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110070449 (FDFT1)
Prenyltransferases [BR:
pvt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110070449 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF2951
Motif
Other DBs
NCBI-GeneID:
110070449
NCBI-ProteinID:
XP_020633792
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MELLKKWLGHPEELYNLVKFKMGGYKTVMPKMNQAWWELLLLSRCISTFILPVFTPSSES
SLPFHICSAYRSNSHAVCIFYLVLRALDTVEDDMTINLETKVPILHNFHSYLYQPDWRFM
ESNEKDKQVLEDFPTISLEFRNLAKVYQDVIADVCHKMGVGMVEFLEKKVDSEKDWDKYC
HYVAGLVGIGLSRLFSASQLEDAIVGQDTALANSMGLFLQKTNIIRDYLEDQLEGREFWP
SEVWNKYVKKMSDLAKPENIDKAVQCMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIP
QVMAIATLATCYNNQQVFKGMVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPST
DPSSCRTQQVIASIRSMSLPAGALVSRAPYSRVYLSCIMLLAALSWQYLSTVSKATEEYV
HTGEN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctaaagaagtggttgggtcacccggaggagctctacaacctggtgaaattc
aagatggggggctacaagaccgtcatgcccaagatgaaccaggcttggtgggagctgctg
ctgctgtcaagatgcatcagtacgtttattttaccagtcttcactccttcatctgaatct
agtctgcctttccatatatgttctgcatacagatcgaacagtcatgccgtctgcatcttc
tacctggttctccgagccttggacacggtcgaggatgacatgaccatcaacctggaaacc
aaggttcccatcctgcacaacttccactcgtacctgtatcagccggactggcggttcatg
gagagcaatgagaaggacaagcaggtgctggaggatttcccaacgatctccctggagttc
cggaatctggccaaggtctaccaggatgtgattgctgacgtttgccacaaaatgggcgtg
gggatggtcgagtttttggaaaagaaggtggattctgagaaagactgggacaagtattgt
cactacgtcgccgggctggtagggattgggctctcccggctgttctcggcctcccagctg
gaagacgccattgttggccaagacacggcgctcgccaactccatggggctcttcctgcag
aaaaccaacatcattcgggattacctggaggaccaacttgaaggcagagagttctggccc
agcgaggtttggaacaagtatgtgaagaaaatgtcggatctggccaagccagagaacatt
gacaaagcggtccagtgtatgaacgagctcatcaccaacgccctccatcacgtgcctgac
gtcctgacttatttgtcccgcctcaagaaccagagtgtgttcaacttttgcgctattcca
caggtgatggccattgctaccttagcaacctgctacaacaaccagcaggtcttcaagggc
atggtgaagattcggaagggacaggctgtcaccctgatgatggatgcgacgaacatccag
gctgttaaagccatcatgtaccaatatgtggaagagatataccagaagatcccaagcaca
gacccttcctcttgcagaacgcaacaggtcatcgcctcgatccgatccatgagcttgccg
gctggagcccttgtctcccgggccccttattcccgggtctacctgtcctgcattatgctt
ctcgctgctttgagctggcagtatctcagcaccgtatcgaaagcgaccgaggaatacgta
cacactggcgaaaactga
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