Pogona vitticeps (central bearded dragon): 110071997
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Entry
110071997 CDS
T05000
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvt03016
]
110071997 (TRUB1)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
110071997 (TRUB1)
Transfer RNA biogenesis [BR:
pvt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
110071997 (TRUB1)
Prokaryotic type
110071997 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
110071997
NCBI-ProteinID:
XP_020635623
UniProt:
A0A6J0SLC3
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MSLNEDDNVREPLDSSKDLRFLPITFSHSLFFSARKYTLVGELGKATDTFISTGKVTEEK
PYDWITKEALENVLQKFTRNIMXVPPLYSALKKDGQRLSTLVRKGESVEPKPARPVTVYS
LTLKNLKPPLFTFDVECGGGFYVRSLVNAIGKDLSLVYSFLGLXSSATMQELTRTKQGPF
ALEEHALSEDRWTTDEIIQSLEHCMRLLRAKLYRKELKTKLSEEHPVSCEDKR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaatgaagatgacaatgtaagagagccacttgattcgagcaaagacctccgt
tttctccccatcaccttttcacattcattatttttctctgcacggaaatacactctagtt
ggggaactgggaaaggcaacagatacatttatttctacaggaaaagttacagaagaaaaa
ccttatgattggataacaaaagaggctcttgagaatgtcctgcagaagtttacaaggaac
atcatgtaagttcctccactctattctgccctgaagaaagatggacagaggttgtcaacc
ttggttaggaaaggagaatctgtggagccaaagcctgccaggccagttaccgtttacagc
ctcactctcaaaaatttaaagccacccttgttcacatttgatgttgaatgtgggggcggc
ttttatgtcagaagcttggtcaacgccattggcaaagatttgtctttggtttactccttt
ttggggctatagagctctgccactatgcaagagttgacccgaaccaagcaaggacccttt
gcactggaagaacatgctctttctgaggacagatggacaactgatgaaatcatccagtcc
ctggagcattgcatgcgtcttctccgggcaaagctgtatcgtaaggaattaaagacaaag
ttatctgaagaacaccctgtgagctgtgaagataagcgataa
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